Gene Shewmr4_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2811 
Symbol 
ID4253382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3365890 
End bp3366537 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content47% 
IMG OID638119446 
Productredoxin domain-containing protein 
Protein accessionYP_734939 
Protein GI113971146 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCCC TATTACAGCG CTTTTTACTG ACAACCACCC TATTGCTCGG CAGTTTTGTC 
AGTCAGGCCG ACCCTATCGC CAAGGATGAA TATTCCGTTA GCCCACTGCT AAACGGCGAG
CAAATCCCCA CAATCACTTT GCAAGATATG AATGGGCAAA GCGTTGATTT AGCAAAATTA
ACGGCACAAA AACCAACCAT TTTCTTCTTT TACCGTGGCG GCTGGTGCCC CTTTTGCAAC
AACCAAATGG GGCAGCTAAA AGCCATCGAG CCTAAACTTA TCGACATGGG CTTTCAATTA
GTCGGTATTT CGCCGGATAC GCCCGCACAG CTAAAATCAT CGGCCGCTAA AAACGAGCTT
AAATACCAGC TGCTTTCCGA TGAAAAAATG CTGGCATCAC AAGCCTTTGG ACTCGCCTTT
TACACCAGCA AACAAGTCAC TGATACTTAT TTGAGTCGCT TAAAACTGGA TAACCCACTG
TGGACCACGC CCGAAGGCGA CAAAAGATTA GTGCTGCCAG TGCCAGCTAT CTATATCACC
GACACAAAAG GGTTAATCCA TTTCCAATAT GTAAATCCCA ACTACAAGGT GAGACCCGCG
CCTAAGTTAA TTCTGACCGC AGCAAGCCTT GTCAGTGCCC CAGAATAA
 
Protein sequence
MQSLLQRFLL TTTLLLGSFV SQADPIAKDE YSVSPLLNGE QIPTITLQDM NGQSVDLAKL 
TAQKPTIFFF YRGGWCPFCN NQMGQLKAIE PKLIDMGFQL VGISPDTPAQ LKSSAAKNEL
KYQLLSDEKM LASQAFGLAF YTSKQVTDTY LSRLKLDNPL WTTPEGDKRL VLPVPAIYIT
DTKGLIHFQY VNPNYKVRPA PKLILTAASL VSAPE