| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2809 |
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| Symbol | |
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| ID | 4253380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3363156 |
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| End bp | 3364457 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119444 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_734937 |
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| Protein GI | 113971144 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTGCCCC GAGATTTTAC GCGCTATCTC AGATTGCGGT
TATCAAAAAA TGACACCTAT TCAGCAGCAA GCGATCCCCG CCATCCGCCG CGGGCAAGAT
GTGCTCGCCA GCGCGCAAAC GGGCACTGGT AAAACGGCGG CATTCGCATT ACCTATACTG
CAAAAGATGG CAGAAAATCC CAGCGAGACC TTAAAATCGA ACGCGCGGGT ATTAATCTTA
ACGCCGACTC GCGAGCTCGC AGCTCAAGTT GCCGACAACG TTGAAGCCTA CAGCAAGTAT
TTAAATTTCA GCGTGTTAAC CATTTACGGC GGTGTAAAGG TTGAGACTCA GGCGCAAAAA
CTTAAACGCG GTGCCGATAT TATTGTCGCG ACGCCAGGGC GTTTGCTCGA GCACCTTACC
GCCTGTAATT TAAGTCTCTC TAGCATCGAC TTTTTAGTGC TCGATGAAGC CGACCGTATG
TTAGACATGG GCTTTAATGC GGATATTCAA AAAATCCTCC AAGCGGTGAA TAAGAAGCGT
CAAAACCTAT TGTTCTCGGC CACCTTCTCC AGCGCGGTGA AAAAACTGGC CAACGAGATG
ATGGTCAAGC CTCAAGTCAT CAGCGCCGAT AAGCAAAACA CCACCGCAGA TACCGTGAGC
CAAGTGGTGT ATCCGGTTGA GCAGCGCCGT AAGCGCGAAC TCTTATCCGA ACTGATTGGT
AAGAAGAACT GGCAACAAGT GTTGGTCTTT ACCGCGACGC GTGATGCGGC CGACACCTTA
GTGAAAGAAT TGAATTTAGA CGGCATTCCG TCTGAAGTGG TGCACGGAGA GAAGGCGCAA
GGTAGCCGTC GCCGCGCACT GCGTGAGTTT ATGTCGGGTA AGGTACGCGT CTTAGTCGCG
ACCGAAGTCG CCGCCCGCGG CTTAGATATT CCCAGCCTTG AGTATGTGGT CAACTTCGAC
TTACCCTTCC TCGCCGAAGA CTATGTACAC CGTATTGGCC GTACCGGTCG CGCGGGTAAA
TCTGGGGTCG CGATTTCATT TGTGAGCCGT GAAGAAGAGC GCACCTTAGC GGATATTGAA
AAGCTTATCG GCCAAAAAAT TCGTCGTATT ACCGTTCCCG GATACGAAGT TGGTAGCCGC
GACTTGCTGT TAAAGCAGCT ACAAACCCGT CGCAGTTTTG CCAAGAAACA ACAGCGACTC
GACAACGTCA GCGAGCAGAT TGTCGCCGAG AAAAGCATGC AGGGCCGCCG CGTGAAAATG
AAAGTTGGCC AAGCCCCAAG CAAGGCGAAA AAGCTGAAAT AA
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| Protein sequence | MRFESFSFCP EILRAISDCG YQKMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL
QKMAENPSET LKSNARVLIL TPTRELAAQV ADNVEAYSKY LNFSVLTIYG GVKVETQAQK
LKRGADIIVA TPGRLLEHLT ACNLSLSSID FLVLDEADRM LDMGFNADIQ KILQAVNKKR
QNLLFSATFS SAVKKLANEM MVKPQVISAD KQNTTADTVS QVVYPVEQRR KRELLSELIG
KKNWQQVLVF TATRDAADTL VKELNLDGIP SEVVHGEKAQ GSRRRALREF MSGKVRVLVA
TEVAARGLDI PSLEYVVNFD LPFLAEDYVH RIGRTGRAGK SGVAISFVSR EEERTLADIE
KLIGQKIRRI TVPGYEVGSR DLLLKQLQTR RSFAKKQQRL DNVSEQIVAE KSMQGRRVKM
KVGQAPSKAK KLK
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