| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2805 |
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| Symbol | |
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| ID | 4253376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3354576 |
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| End bp | 3357182 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119440 |
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| Product | glycosyl hydrolase family chitinase |
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| Protein accession | YP_734933 |
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| Protein GI | 113971140 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGA CTCAAATCTC CACCACTGCG ATGCTGGTGG CTTCGGTGCT GGCATCCGTC
GCCAGTTTTC AAGCATTTGC CGCGCTCCCA GGAAAACCTA CCTTAGGTTG GGGAGAAACC
AAGTTTGCTA TTATCGAGGT GAATCAAGCC GCCTCAGCCT ATAACCAGTT AGTGACGGTT
AAGGATGCTG CCGACGTGTC GGTAAATTGG AACCTGAATA ATGGCGATAT TGGCAACAAA
GCCCAAGTGT TGCTCGATGG CAATCTGGTT TGGGAAGGAC CCGCCAGCGC CAATGGGGTC
GCTAATTTTA AGGTGAACAA GGGCGGCCGT TATCAAATGC AAGTGCAATT GTGTAACAGT
GACGGTTGTA CGGCGAGTGA TGCTAAACAA ATCCTCGTGG CAGATACTGA TGGTAGTCAC
TTAGCGCCAC TGAATGCGCC TTTGAAAGAA AACAATCGTC CCTATGCGAA TAAATCCGGC
AAAGTAGTCG GGGGTTATTT TGTGGAGTGG GGAGTTTATG GCCGTAAGTT CCCCGTCGAT
ATGGTGCCAG CACAAAACTT AACCCACATT TTATATGGCT TTACTCCTAT ATGTGGCGGC
AATGGCATCA ACGACAGCCT AAAAGAAATC GAAGGCAGCT TTGAGGCATT GCAACGTGCC
TGTGCTGGCC GTGCCGATTT TAAAGTTGCA ATTCATGACC CTTGGGCTGC GATTCAAAAG
CCGCAGGCGG GTGTGAGTGA TTATTCCGAC CCTTACAAAG GCAACTTCGG CCAATTGATG
GCGTTAAAAC AAGCCTATCC CGATCTGAAG ATCCTCCCCT CCGTTGGCGG CTGGACGCTC
TCGGATCCCT TCTACTTTTT AGGGGATAAA ACCAAGCGTG ACACCTTTGT GGCCTCGGTG
AAGGAGTTTT TACAAACTTG GAAATTCTTT GATGGTGTTG ATATCGACTG GGAATTTCCC
GGCGGCAGTG GTGCTAACCC AAGCTTAGGT AATGCCAATG ACGGAGAAAC CTATGTCACT
CTGATGCGTG AATTGCGGGC GATGCTCGAT GAACTCAGCG CCGAAACCGG ACGCACCTAT
GAGCTAACGT CGGCCATCAG TGCGGGCGGC GATAAGATTG CTAAGGTCGA TTATCAGGCG
GCGCAGCAAT ATATGGATTA CATCTTCCTG ATGAGTTACG ACTTTAATGG CGGCTGGACC
AATACAGAGC TTGGGCATCA AACCAATCTC TATGAGGCGA GCTGGGATCC TAATACCCGT
TACACCACGG ACAAAGGCGT AAAAGCCCTG CTCTCTCAAG GGGTGACTCC GGGTAAGATT
GTGGTCGGTG CTGCTATGTA CGGCCGCGGC TGGACTGGGG TGAATGGCTA TAGCGGTAAC
AATCCTTTCA CGGGCACTGC AACGGGCAAA GTGAAGGGCA CTTGGGAAGC GGGCGTGGTG
GATTATCGCC AGATCGCCAA GGATTATATG GGCGCAGGCT GGAGCTATGC CTATGATGAA
ACTGCCGAAG CACCATCTGT CTTTAATGCA TCAACGGGTG ATTTAATTAC CTTCGACGAT
GCTCGTTCTG TTAAAGCCAA GGGCCAATAC GTGCTGGCCA ATCAGCTCGG TGGTCTGTTC
GCCTGGGAAA TTGATGCCGA TAATGGTGAC ATTCTCAATG CCATGCACGA AGGTCTAGGT
CATGGAGAGG GCACAACGCC ACCAGCGAAT AAAGCGCCGA TTGCCAATGC GGGGACGGAT
GTCACCGTAA CGGGCACGTT GGATGTGACG CTAAACGGCA GCGCGTCGCG GGATCCTGAA
AACGCAGCTT TAAGTTATCA ATGGAGTCAA GTCTCGGGCC CAAGCTTGAG TATCACTAAT
GCGGATATGG CCAATGCTGT GGTGCAGCTG AGCGCGACGG CGTCGGATGT GGTGTATGTG
TTTAGCCTTC GAGTTACCGA TCCTGAAGGC TTATCCTCAA CCGATACAGT GACTCTCACC
CATAAGGCCG AGACCGTAAA CCAAGCGCCT GTAGTGACTG TGCCAGCGAG TGTGACGGTT
GAAGCGGGGC AATCAGTCAG TATCAACGCG ACGGCGACCG ACGCCGATGG CGACAGTCTT
ACCTACGCAT GGACAGTGCC AAGCGGCGTG GCGGCGAGTG GACAAAACAG TGCCACACTG
GTGGTGACGG CGCCAGCTGT TACTCAATCT ACCCAATACA GTTTGAGTGT ATTAGTCTCC
GATGGCTCCT TAGATGCTAG TGCCGCATTG ACTTTAACCG TGACGCCTAA GGCAACGGGT
GGTCAATGTG ATGCCACTGA CCCTAATGCG GCCAATTATC CGGCGTGGAA TACGACAAGC
ATTTACAACA CGGGTGATAC AGTGAGTTAT AACCAGCTGG TTTGGAAGGC GAAATACTGG
ACTCAAGGTG ACACACCTTC AAGAACGGCT GACCAATGGC AATTGTTGAG TCAGGTCGAG
CTGGGTTGGG ATGCGGGTGT TGCCTACAGC GGTGGTGCAA CTACTAACTA CAACGGTCGT
CAGTGGCAGG CCAAATACTG GACTAAGGGA GATGTTCCCG GTGTCGCGTC CGTTTGGACT
GATATTGGTG CAGCAACGTG CCCGTAA
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| Protein sequence | MFKTQISTTA MLVASVLASV ASFQAFAALP GKPTLGWGET KFAIIEVNQA ASAYNQLVTV
KDAADVSVNW NLNNGDIGNK AQVLLDGNLV WEGPASANGV ANFKVNKGGR YQMQVQLCNS
DGCTASDAKQ ILVADTDGSH LAPLNAPLKE NNRPYANKSG KVVGGYFVEW GVYGRKFPVD
MVPAQNLTHI LYGFTPICGG NGINDSLKEI EGSFEALQRA CAGRADFKVA IHDPWAAIQK
PQAGVSDYSD PYKGNFGQLM ALKQAYPDLK ILPSVGGWTL SDPFYFLGDK TKRDTFVASV
KEFLQTWKFF DGVDIDWEFP GGSGANPSLG NANDGETYVT LMRELRAMLD ELSAETGRTY
ELTSAISAGG DKIAKVDYQA AQQYMDYIFL MSYDFNGGWT NTELGHQTNL YEASWDPNTR
YTTDKGVKAL LSQGVTPGKI VVGAAMYGRG WTGVNGYSGN NPFTGTATGK VKGTWEAGVV
DYRQIAKDYM GAGWSYAYDE TAEAPSVFNA STGDLITFDD ARSVKAKGQY VLANQLGGLF
AWEIDADNGD ILNAMHEGLG HGEGTTPPAN KAPIANAGTD VTVTGTLDVT LNGSASRDPE
NAALSYQWSQ VSGPSLSITN ADMANAVVQL SATASDVVYV FSLRVTDPEG LSSTDTVTLT
HKAETVNQAP VVTVPASVTV EAGQSVSINA TATDADGDSL TYAWTVPSGV AASGQNSATL
VVTAPAVTQS TQYSLSVLVS DGSLDASAAL TLTVTPKATG GQCDATDPNA ANYPAWNTTS
IYNTGDTVSY NQLVWKAKYW TQGDTPSRTA DQWQLLSQVE LGWDAGVAYS GGATTNYNGR
QWQAKYWTKG DVPGVASVWT DIGAATCP
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