| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2803 |
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| Symbol | |
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| ID | 4253374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3352489 |
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| End bp | 3353817 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119438 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_734931 |
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| Protein GI | 113971138 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACCA AAGCGGCAAA ACCTCTGGTC AAGCTCGTCG ACCGATATTT ACCCGATCCT
TATATCTTTG TCTTGCTCTT AACCTTAGTG GTGCTGATTT CGGCCGTGGT AGCCGAGCAG
AAAACCCCAC TCGAAGTCAT CAATTACTGG GGCGATGGCT TTTGGGCGCT GCTGAGTTTT
TCGATGCAGA TGCTATTAGT GCTGGTGGCG GGATTTATGC TCGCCAGCTC GCCACCGATT
AAGAAATTAC TCGATGGCAT CGCAGGATTT GCCAAGTCGG CGCCTCAGGC CATTATCTTA
GTGACCTTGG TTTCCCTCGC CGCCAGTTGG ATTAACTGGG GATTTGGCTT AGTGGTCGGC
GCCTTATTCG CTAAGGCCTT AGCGCGTAAA GTGCGTGTGG ATTACCGTTT ATTGGTCGCC
AGTGCTTACT CGGGATTTGT GGTTTGGCAT GGCGGCTTAG CGGGCTCGAT TCCGTTAACT
ATTGCCACTG CTGGGCATTT CTCAGAATCA CAAATCGGTA TTATCCCCAC CAGCGAGACC
ATCTTCGCTA GCTTTAACCT GCTGTTAGTA CTGATTTTGT TTGTGGTGAT GCCACTGGTG
AACCGCTTTA TGTTGCCAGA AGATAAAGAC TGCATTTATG TTGATCCTAA GGCGCTGGAG
GATGGGGGCG CAGACGATAA AGCGGTACAG TTAACGGCCA ATACGACTCG CCCTGCGGAT
AAATTAGAAA ACAGTCGCTT GCTCGGTTGG AGTGTCGGCG GCGCGGGACT CGTTTACTTA
GGCTATTACT TTGCGGTGCA GGGCGGCAGC TTAAACCTTA ACCTAGTCAA CTTCTTATTT
TTATTCCTCG CCATAGTGCT ACATCAAACG CCACGCAGTT TATTACTGAG TCTCAACGAG
GCCATTAAAG GCGGCGCGGG TATCGTCATC CAGTTTCCTT TTTACGCTGG GATTATGGCG
GTGATGGTGC AATCGGGGTT AGCCCAGAGT ATTTCCGAAG GTTTTGTGGC CATCGCCAGT
GCCGAAAGTC TACCATTTTG GAGCTTTATC AGTGCAGGGA TTGTGAATAT TTTCGTGCCT
TCGGGGGGCG GACAATGGGC GGTGCAGGCG CCAATTATGT TACCCGCCGC CGAAGCCTTG
GGCGCCGATG TAGCACGTGT TGCTATGGCA GTGGCTTGGG GTGATGCGTG GACCAATCTT
ATTCAGCCTT TCTGGGCGCT GCCAGTGCTG GCAATCGCCG GATTAAAGGC GAGGGATATC
ATGGGGTTCT GTTTAATGCA GTTGCTGATC ACCGGGGGGA TTATCAGTAT CGCCCTCAGC
TGGTTTTAA
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| Protein sequence | MLTKAAKPLV KLVDRYLPDP YIFVLLLTLV VLISAVVAEQ KTPLEVINYW GDGFWALLSF
SMQMLLVLVA GFMLASSPPI KKLLDGIAGF AKSAPQAIIL VTLVSLAASW INWGFGLVVG
ALFAKALARK VRVDYRLLVA SAYSGFVVWH GGLAGSIPLT IATAGHFSES QIGIIPTSET
IFASFNLLLV LILFVVMPLV NRFMLPEDKD CIYVDPKALE DGGADDKAVQ LTANTTRPAD
KLENSRLLGW SVGGAGLVYL GYYFAVQGGS LNLNLVNFLF LFLAIVLHQT PRSLLLSLNE
AIKGGAGIVI QFPFYAGIMA VMVQSGLAQS ISEGFVAIAS AESLPFWSFI SAGIVNIFVP
SGGGQWAVQA PIMLPAAEAL GADVARVAMA VAWGDAWTNL IQPFWALPVL AIAGLKARDI
MGFCLMQLLI TGGIISIALS WF
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