Gene Shewmr4_2801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2801 
Symbol 
ID4253372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand- 
Start bp3351018 
End bp3351626 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content51% 
IMG OID638119436 
ProductTetR family transcriptional regulator 
Protein accessionYP_734929 
Protein GI113971136 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAC CCGAAGTGTT GTCAGATATG CCCTTAGATA AACGTCAACA GCTCATCAGC 
ACGGCATTTA AACTGTTTTA TTTTCAGAGC GTACATGGGG TAGGCATTAA CCAGATTTTG 
CAGGAGTCGG CGATTGCCAA AAAAACCTTG TACCATCATT TTGCCAGTAA GGATGAGTTG 
GTCGAAGCAG TGGTGCTGTA CCGCGACCAC GTGTTTTATC AATGGTTAAG CGAGCGAGTG 
CAGGCGGCCG AGACGGGTAA GGCGGGGATC CGCGCGTTAT TTATGGCGCT CGATGACTGG 
TTTAATCAAA GAGTGCCGCA GCTGTGTGAG TTTCGGGGCT GTTTTTTTAT CAATGCGAGT 
GCCGAATTTA CCGATGCCAG CCATCCCGTG CATCGTTTGT GCGCCGAGCA TAAACAGCGG 
GTGGCAGATT TAATGGGTCA GCAAGTGGCG GCCTTGGGCT TGTCCGAGGC AAAAGCGGCT 
TATCTTGTCG ATACCCTATG CCTATTGAAG GAAGGCGCCA TAGTGTCGGC GCAGCTGCGC 
GGCGACACAG GTGCTGCCAT GCAAGCGTTA AAAGCTATCG AGCAATTGAT TGAAATAGAA 
ACGAATTAG
 
Protein sequence
MPQPEVLSDM PLDKRQQLIS TAFKLFYFQS VHGVGINQIL QESAIAKKTL YHHFASKDEL 
VEAVVLYRDH VFYQWLSERV QAAETGKAGI RALFMALDDW FNQRVPQLCE FRGCFFINAS 
AEFTDASHPV HRLCAEHKQR VADLMGQQVA ALGLSEAKAA YLVDTLCLLK EGAIVSAQLR 
GDTGAAMQAL KAIEQLIEIE TN