Gene Shewmr4_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2800 
Symbol 
ID4253371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3350536 
End bp3351009 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content51% 
IMG OID638119435 
Producthypothetical protein 
Protein accessionYP_734928 
Protein GI113971135 
COG category[S] Function unknown 
COG ID[COG3326] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA AAAGAGCCAA TAAAACGCCG TCCGCTCCAG TACATGAACG AAAAGCGACT 
CAAAGAAGAG TGACTCAATC TAGAACCACA AAATCAAGAG CCGCGCGATC ACGTCAGAGT
TCGATGCCTT TATTATTAGC ACTGGTTTTT CTGGCGATGT TAATCGGCGC CGCTTGGTGG
CATATGCTGC CCCTCGCGAT TGTGGGTTTA TATCTGCTGC TGAGTTTATC CACCTTTATC
GCCTACGCCT TCGACAAATC GGCGGCGCGT AAAGGCCGCT GGCGCACCAA GGAAAGCACC
CTGCATCTAA TGTCTCTCCT CGGTGGTTGG CCCGGCGCAC TGTTTGCCCA GCAGCTACTA
CGGCATAAAT CGGTCAAAGC CGCCTTTCGC CAACTGTTTT GGCTCACGGT CGTGACCAAC
TTAGCCCTGC TGGGTTATGG GATCCAAACG GGCTTCATGG ATAGATTGAT TTAA
 
Protein sequence
MNNKRANKTP SAPVHERKAT QRRVTQSRTT KSRAARSRQS SMPLLLALVF LAMLIGAAWW 
HMLPLAIVGL YLLLSLSTFI AYAFDKSAAR KGRWRTKEST LHLMSLLGGW PGALFAQQLL
RHKSVKAAFR QLFWLTVVTN LALLGYGIQT GFMDRLI