Gene Shewmr4_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2794 
Symbol 
ID4253365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3344428 
End bp3345108 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content50% 
IMG OID638119429 
ProductYheO domain-containing protein 
Protein accessionYP_734922 
Protein GI113971129 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTGC AAGACTTAAC TCAAAGCGAT CTGGATATAC TCAAGTCCAT CGAAAATATC 
GTCGATGGGA TTGCTGCCAT GTATGGCCAA CACACTGAAG TGGTGCTGCA CAGTTTGGAT
GCTAAGCACC CTTCGGTGAT CAAAATTGCC AATGGCCATG TTACTGGCCG CGAGGTCGGT
GCGCCCATTA CCAACCTTGC CTTGCTCAAG CTTAAAACGG GTCAGGATAT TTCCAACTCT
TACCTGACTA AGTGCGCCAA CGGTAAAACT TTACGCTCGA TCACCACAGT GATCCGCAAT
CCCAAAAACC TGCCGATTGG GTTGCTGTGC ATTAATAGCG ATATGGATGC ACCGCTGCAA
TCTGTGCTGC GCACTATGAT GCCGGAGCAA CTCCTTGGCA GCGAACTGAC CAGTTCGCCC
GAGGTGTTTG CGCGCAATAT TGATGAGGCG CTGCACAGCA CTATCGATAG TGTCAACCAC
GAGGTACGTG CGAATCCCGC GATTTCCCCT TCACAAAAGA GTCGCGAAAT TGTCAATCAA
CTCCATGAGT TAGGGATTTT CGAACTCAAG GATAGCGCCC AAGTGGCCGC CGCTCGTTTG
GGGATATCAG TGCATTCGAT CTATCGCTAT CTGCGTGAAA TCAAAGCCAA TCAAACCGAA
AGCGAGAAAA GCCTCGCTTA A
 
Protein sequence
MKLQDLTQSD LDILKSIENI VDGIAAMYGQ HTEVVLHSLD AKHPSVIKIA NGHVTGREVG 
APITNLALLK LKTGQDISNS YLTKCANGKT LRSITTVIRN PKNLPIGLLC INSDMDAPLQ
SVLRTMMPEQ LLGSELTSSP EVFARNIDEA LHSTIDSVNH EVRANPAISP SQKSREIVNQ
LHELGIFELK DSAQVAAARL GISVHSIYRY LREIKANQTE SEKSLA