| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2786 |
|---|
| Symbol | |
|---|
| ID | 4253357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3334447 |
|---|
| End bp | 3336147 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638119421 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734914 |
|---|
| Protein GI | 113971121 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.373413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCCT TATTACTATT ATCTGCACTA TTTCTGTCAT GTAATGTGCT GGCTGATCGC
ATCTTACTCG ACGAACAATG GCAGCCTAGC GAGGTGCCTA GTGAAGCAAT TTACTACCAG
AAACAGCTAG CGACCGAGCA AGAGGGCGCG TGGCCAGTCG CGCTTTTTTA TGTAGAGACA
GATAAACCCG TTTTTAAAGG GACAGTCAAC GGCCCCAATT TAGCGGAGAG TGCTATTGTC
GGTGATTTCG AATTTTATCA CCCCAATGGT CAACTCTCTC GCAAGGGACG TAGCGATGCA
CAAGGGCGTT ATCAGGGAAC GCATCTGTAT TACTGGGAAG ATGGAACACG CTCGGGTGAG
TACCAATATC TGAATGGCAG GCTCCATGGT GAGCAAAAAC GTTATCACAC CAATGGCCAA
TTACGCGACC ATCAATATTA TGCGAATGGT GTGGAGTCCG GATTAGCGCA AAGTTATTTC
GACAATGGCC AGCTGCAAAC ACGGGTAACC TATGGCGCTA AGGGGATGGA AGGCTTATAT
GAAAGCTTCC ACAGCAATGG TCAGCCAGAG CAAACCGTGA ATATGGTGGC GGGGAAAAGA
GAAGGCGAGC GCCTGTATTG GACAAAAGAA GGCTGGTTAT TCACTAAAGA GTTTTATCTT
AAGGGGAAAT TACATGGTGA AGTGTTGGTT TATCATGCTC CTGATGTGCC TCGAGAGATT
AAACATTATC AGCATGATAA GCAGGTGGGT ATCCAACAAC GATTTGATCA GCAAGGGCGA
TTAACGCAGC AGCAGAAATA CGACACTCAT GGCCGTGAAA TTCAGGATAT AACCTATGCG
AGTGCGGGCC ATGTGACCTC CCAAATAGAC ACCCAATATC TCGCTAAAGG CCATATTACC
AACGAGCAGC GGTTCGATGA GAGTGGAAAG TTAACTTATC AATATCAGCG CGATACCGTA
AAAGATTGGA GTCTGCGTCA GCGTTTTAAT GCGGCGGGTT CGCTGCTTGA ACGAGAAGAG
CGAGTTAAGG GGAGCTACGA AGGGGTATAT GTTGACGCAG GCTGGAATAG CTCTATCAGG
CGGATAAATT ACCGTAAAGG CAAAATGCAC GGCGCATATC GTGAAGATAA CGCTGAAAAT
GGCAGTTTTG TCACTGGGCA ATATCAATCG GATGTAAAGG TCGGAAAGTG GGTGAGCCAA
AATCCCGATT CGACGCGTAT CGAACAGTTT AATTCGCAAG GGCAGCTCAA CGGCGAACAG
AGCGATATCG CCGCCGACGG CACGGTAATG TATCGAGCGT TTTATAAAAA CGATAAGTTG
CATGGCGCTT TTGTACAGCG AGGCTTCGAT AAACAACTGC AAGCCCAAGG CCAGTATGTT
AACGGCCAGC GTGAAGGTAA ATGGTTAGTA CAAGACGAGA GCAGTTACAG TGAGGTGAAG
TTATGGCACG GCCAATACCA AGCGGGGCAC GAAGTGGGCC CGTGGCGAGC CATGTCCGCT
AACGGCCACT TATTGGGGAC GATGCAGTAC GATAACAAGG GCCTTTTGCA AGGGAAAAGC
TACAGCTTCA ATGAAGACGG CAGCCTACTG CGAAGCGAAG AGTATGTCGA TAACCAGTTA
CACGGCAAGT TGGTTTACTA CTTCAACGGC GAAGCCTCAT CCGAATACCA TTATCAAAAT
GGTGTCGATG TGGGCCAATA A
|
|---|
| Protein sequence | MRALLLLSAL FLSCNVLADR ILLDEQWQPS EVPSEAIYYQ KQLATEQEGA WPVALFYVET
DKPVFKGTVN GPNLAESAIV GDFEFYHPNG QLSRKGRSDA QGRYQGTHLY YWEDGTRSGE
YQYLNGRLHG EQKRYHTNGQ LRDHQYYANG VESGLAQSYF DNGQLQTRVT YGAKGMEGLY
ESFHSNGQPE QTVNMVAGKR EGERLYWTKE GWLFTKEFYL KGKLHGEVLV YHAPDVPREI
KHYQHDKQVG IQQRFDQQGR LTQQQKYDTH GREIQDITYA SAGHVTSQID TQYLAKGHIT
NEQRFDESGK LTYQYQRDTV KDWSLRQRFN AAGSLLEREE RVKGSYEGVY VDAGWNSSIR
RINYRKGKMH GAYREDNAEN GSFVTGQYQS DVKVGKWVSQ NPDSTRIEQF NSQGQLNGEQ
SDIAADGTVM YRAFYKNDKL HGAFVQRGFD KQLQAQGQYV NGQREGKWLV QDESSYSEVK
LWHGQYQAGH EVGPWRAMSA NGHLLGTMQY DNKGLLQGKS YSFNEDGSLL RSEEYVDNQL
HGKLVYYFNG EASSEYHYQN GVDVGQ
|
|---|
| |