| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2777 |
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| Symbol | |
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| ID | 4253348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3323742 |
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| End bp | 3324986 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638119412 |
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| Product | phage integrase family protein |
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| Protein accession | YP_734905 |
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| Protein GI | 113971112 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.179227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATTA TCACTACTCG CCTAACAGAT AAAGAAATCA AAACAGCCAA GCCAAGGGAT
AAAGAATATA ACCTATTTGA CGGTGACGGA CTCCGCTTAA GAATTAAACC AAACGGCTCC
AAACAATGGA TTCTGAACTA TTACAAACCC ACCAATCGTA AGAGGGCAAA TCTCAGCTTA
GGCAAGTATC CCGATCTATC GCTAGCAAAT GCCCGTAAGC TGTCACTAGA AGCAAGAGAA
TTAATCGCTC AAAATATCGA TCCCCAAGAT GCTCGAAAAG AGCGTCAGCA AGAAGTTGAT
GCAATCCACC TGCATACTTT TTATAACGTA GCTAAAGAAT GGTTTGATAT GAAAAAAGAC
TCGGTATCGG CAGACCATGC AGTCGATACT TGGCGCTCTT TGGAGCTTCA CATTTTTCCT
AGCCTATCTA ACACGCCCGT AAAAGATATA ACGGCTCCAT TTGTCATAGA GCTTCTAAGA
CCAATTGAAG CTAAAGGCAG CCTTGAAACA GTCAAACGTC TATCGCAACG TTTGAATGAA
GTCATGAACT TTGCCACCAA TTGTGGATTG ATTAAGGCTA ACCCATTAGC AAATATTAAG
GCTGCATTCA AAAAGCCTAA AAAAGAGAAT ATGGCTTCCC TTGCCCCCGC CGAACTCCCT
GAACTAATGC GCTCACTTTC CTACGCAAGC ATTAAGTTGA CGACACGATG TTTGATCGAG
TGGCAGCTTC ATACAATGAC TCGCCCTAGT GAAGCCGCTG GTGCTAGATG GGATGAAATT
GACTTGGATA GCAGAGTTTG GACAATCCCA GCTGAACGTA TGAAGAAAAA GCGCGAACAC
CGTATCCCAT TAACAGAGCA GATGCTGGTG CTATTGGATT TAATCAAGCC TATTAGCGGT
CATCGTGAGT ACGTTTTCCC CTCCGATCGT GAACCAACTA AGCCATGTAA TAGCCAAACC
GCAAATATGG CACTAAAACG CATGGGTTTT GCGGGACGAT TAGTTAGTCA CGGTCTACGT
TCACTAGCCA GCACTACATT GAATGAACAA GGTTTCGATA GAGATTTAGT TGAAGCAGCA
CTATCACACG TTGAAGAAAA TCAGGTTCGT AGCGCTTATA ACCGCACCGA TTACTTAGAA
CGTCGTCGGC CGATGATGAG CTGGTGGAGC GGTCACATTG AGGAAGCAGC AAGAGGCGGT
TCGGCATTAA CAAGAACTAA AACGTTGAAA GTTGCGGCTG AATAA
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| Protein sequence | MAIITTRLTD KEIKTAKPRD KEYNLFDGDG LRLRIKPNGS KQWILNYYKP TNRKRANLSL
GKYPDLSLAN ARKLSLEARE LIAQNIDPQD ARKERQQEVD AIHLHTFYNV AKEWFDMKKD
SVSADHAVDT WRSLELHIFP SLSNTPVKDI TAPFVIELLR PIEAKGSLET VKRLSQRLNE
VMNFATNCGL IKANPLANIK AAFKKPKKEN MASLAPAELP ELMRSLSYAS IKLTTRCLIE
WQLHTMTRPS EAAGARWDEI DLDSRVWTIP AERMKKKREH RIPLTEQMLV LLDLIKPISG
HREYVFPSDR EPTKPCNSQT ANMALKRMGF AGRLVSHGLR SLASTTLNEQ GFDRDLVEAA
LSHVEENQVR SAYNRTDYLE RRRPMMSWWS GHIEEAARGG SALTRTKTLK VAAE
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