Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2777 |
Symbol | |
ID | 4253348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3323742 |
End bp | 3324986 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638119412 |
Product | phage integrase family protein |
Protein accession | YP_734905 |
Protein GI | 113971112 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.179227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATTA TCACTACTCG CCTAACAGAT AAAGAAATCA AAACAGCCAA GCCAAGGGAT AAAGAATATA ACCTATTTGA CGGTGACGGA CTCCGCTTAA GAATTAAACC AAACGGCTCC AAACAATGGA TTCTGAACTA TTACAAACCC ACCAATCGTA AGAGGGCAAA TCTCAGCTTA GGCAAGTATC CCGATCTATC GCTAGCAAAT GCCCGTAAGC TGTCACTAGA AGCAAGAGAA TTAATCGCTC AAAATATCGA TCCCCAAGAT GCTCGAAAAG AGCGTCAGCA AGAAGTTGAT GCAATCCACC TGCATACTTT TTATAACGTA GCTAAAGAAT GGTTTGATAT GAAAAAAGAC TCGGTATCGG CAGACCATGC AGTCGATACT TGGCGCTCTT TGGAGCTTCA CATTTTTCCT AGCCTATCTA ACACGCCCGT AAAAGATATA ACGGCTCCAT TTGTCATAGA GCTTCTAAGA CCAATTGAAG CTAAAGGCAG CCTTGAAACA GTCAAACGTC TATCGCAACG TTTGAATGAA GTCATGAACT TTGCCACCAA TTGTGGATTG ATTAAGGCTA ACCCATTAGC AAATATTAAG GCTGCATTCA AAAAGCCTAA AAAAGAGAAT ATGGCTTCCC TTGCCCCCGC CGAACTCCCT GAACTAATGC GCTCACTTTC CTACGCAAGC ATTAAGTTGA CGACACGATG TTTGATCGAG TGGCAGCTTC ATACAATGAC TCGCCCTAGT GAAGCCGCTG GTGCTAGATG GGATGAAATT GACTTGGATA GCAGAGTTTG GACAATCCCA GCTGAACGTA TGAAGAAAAA GCGCGAACAC CGTATCCCAT TAACAGAGCA GATGCTGGTG CTATTGGATT TAATCAAGCC TATTAGCGGT CATCGTGAGT ACGTTTTCCC CTCCGATCGT GAACCAACTA AGCCATGTAA TAGCCAAACC GCAAATATGG CACTAAAACG CATGGGTTTT GCGGGACGAT TAGTTAGTCA CGGTCTACGT TCACTAGCCA GCACTACATT GAATGAACAA GGTTTCGATA GAGATTTAGT TGAAGCAGCA CTATCACACG TTGAAGAAAA TCAGGTTCGT AGCGCTTATA ACCGCACCGA TTACTTAGAA CGTCGTCGGC CGATGATGAG CTGGTGGAGC GGTCACATTG AGGAAGCAGC AAGAGGCGGT TCGGCATTAA CAAGAACTAA AACGTTGAAA GTTGCGGCTG AATAA
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Protein sequence | MAIITTRLTD KEIKTAKPRD KEYNLFDGDG LRLRIKPNGS KQWILNYYKP TNRKRANLSL GKYPDLSLAN ARKLSLEARE LIAQNIDPQD ARKERQQEVD AIHLHTFYNV AKEWFDMKKD SVSADHAVDT WRSLELHIFP SLSNTPVKDI TAPFVIELLR PIEAKGSLET VKRLSQRLNE VMNFATNCGL IKANPLANIK AAFKKPKKEN MASLAPAELP ELMRSLSYAS IKLTTRCLIE WQLHTMTRPS EAAGARWDEI DLDSRVWTIP AERMKKKREH RIPLTEQMLV LLDLIKPISG HREYVFPSDR EPTKPCNSQT ANMALKRMGF AGRLVSHGLR SLASTTLNEQ GFDRDLVEAA LSHVEENQVR SAYNRTDYLE RRRPMMSWWS GHIEEAARGG SALTRTKTLK VAAE
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