| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2767 |
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| Symbol | |
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| ID | 4253338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3310810 |
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| End bp | 3312459 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119402 |
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| Product | malate synthase |
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| Protein accession | YP_734895 |
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| Protein GI | 113971102 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00223378 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAC ACACTTTAAG TGAACAGCAA TTGAATTCGA CACAGAATAA GGCCACTGCG
AATGGCACTC TGGCCTTAGT GGGAAATACC ATCCCGGGGC AGGAGGTGAT TTTTACCGAA
GGCGCGCTGG CGTTGCTTGA GTCACTTTGC CGTGAATTTG CGACAGAAGT GCCCACATTA
CTCGCCAAAC GTAAAGATAG ACAGGCGCGT ATCGATAAAG GGGCTTTGCC TGACTTTTTA
CCCGAGACTC GCGCAATTCG TGACGGGGCA TGGAAGATCC GTGGTATTCC GAATGACTTA
CTCGATCGCC GTGTCGAAAT TACCGGTCCC GTCGAACGTA AGATGGTGAT CAATGCGCTT
AATGCAAATG CCAAAGTGTT TATGGCGGAT TTTGAAGACT CCTTAGCACC GAGCTGGCAG
AAAGTCGTGG AAGGTCAGAT TAACCTACGT GATGCCGTGC GCGGTGAGAT TGAGTACACA
GCGCCTGAAA CCGGTAAACA CTACAAGTTA GGCCAAAATC CTGCGGTATT AATTTGCCGT
GTGCGTGGCC TGCACTTAAA AGAGAAGCAC GTTGAATTTA ACCAGCAGTC CATTCCCGGC
GCGTTATTCG ACTTTGCGAT GTTCTTCTAC CATAACTATC GCCAATTGCT GGCGAAGGGC
AGTGGTCCTT ACTTCTATAT TCCTAAACTT GAGAGCCATA TTGAAGCGCG TTGGTGGGCA
AAAGTGTTTG CTTTTGTTGA AGAAAGATTT TGCCTTCAGC CTGGGACAAT CAAATGTACC
TGTTTGATTG AGACCTTACC CGCGGTGTTT GAAATGGACG AAATTCTCTA TGAATTACGC
TCAAACATTG TCGCGCTGAA CTGTGGTCGT TGGGACTATA TCTTCAGCTA TATCAAAACA
TTAAAGCGTC ATAGCGACCG TGTATTACCG GATCGCCAAG CGGTGACCAT GGATACGCCT
TTCTTAAGCG CCTATTCAAG ACTGCTGATC AAAACCTGCC ATAAACGTGG CGCACTGGCG
ATGGGCGGCA TGGCGGCCTT TATTCCAGCG AAGGATCCCG CTCAAAACGA AACCGTGTTG
CAACGGGTAC GTAAGGACAA AGAGCTTGAG GCTCGCAATG GTCACGATGG GACTTGGGTC
GCTCACCCAG GTCTTGCGGA CACGGCAATG GGGATCTTTA ACGAATACAT AGGCCAAGAT
CATCAAAATC AATTGCATAT CACCCGTGAT GTGGATGCAC CGATCCTTGC CGCAGAGTTA
TTAAAACCCT GTGATGGTGA GCGAACTGAG CAAGGGATGC GCCTGAATAT TCGCATCGCT
CTGCAATACC TTGAGGCGTG GATCAGTGGC AACGGTTGTG TGCCGATTTA CGGATTAATG
GAAGATGCGG CAACGGCGGA AATCTCCCGC GCCTCGATTT GGCAATGGAT CCAACATGGC
AAGTCACTCT CAAACGGCAA ACCCGTCACT AAACAATTGT TTAAGGACAT GCTGGTGGAA
GAGTTAGCAA ATGTGAAAAA AGAAGTGGGC GGTGACAGAT TCACCCACGG CAAATTTACC
CAAGCGGCTG TATTGCTTGA GGATATTACC ACTTCGGATG AATTGGTCGA TTTCTTAACC
TTACCCGGTT ACGAGATGCT AACGGCTTAA
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| Protein sequence | MTEHTLSEQQ LNSTQNKATA NGTLALVGNT IPGQEVIFTE GALALLESLC REFATEVPTL
LAKRKDRQAR IDKGALPDFL PETRAIRDGA WKIRGIPNDL LDRRVEITGP VERKMVINAL
NANAKVFMAD FEDSLAPSWQ KVVEGQINLR DAVRGEIEYT APETGKHYKL GQNPAVLICR
VRGLHLKEKH VEFNQQSIPG ALFDFAMFFY HNYRQLLAKG SGPYFYIPKL ESHIEARWWA
KVFAFVEERF CLQPGTIKCT CLIETLPAVF EMDEILYELR SNIVALNCGR WDYIFSYIKT
LKRHSDRVLP DRQAVTMDTP FLSAYSRLLI KTCHKRGALA MGGMAAFIPA KDPAQNETVL
QRVRKDKELE ARNGHDGTWV AHPGLADTAM GIFNEYIGQD HQNQLHITRD VDAPILAAEL
LKPCDGERTE QGMRLNIRIA LQYLEAWISG NGCVPIYGLM EDAATAEISR ASIWQWIQHG
KSLSNGKPVT KQLFKDMLVE ELANVKKEVG GDRFTHGKFT QAAVLLEDIT TSDELVDFLT
LPGYEMLTA
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