Gene Shewmr4_2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2762 
Symbol 
ID4253333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3305821 
End bp3306969 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content48% 
IMG OID638119397 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_734890 
Protein GI113971097 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTA AATTTTTTAT CCCTTCCGTC AACGTATTAG GCAAAGGCGC CGTCGATGAT 
GCTATCGGAG ATATCAAAAC CTTAGGCTTT AAACGCGCAT TAATCGTAAC GGATAAACCT
CTCGTCAAGA TTGGTCTGGT CGGTGAAGTG GCCGAAAAAC TCGGTCAAAA TGGCATTACT
TCAACCGTGT TCGATGGCGT ACAACCTAAC CCAACCGTCG GTAACGTCGA AGCGGGTCTT
GCGCTATTAA AAGCTAACCA ATGTGATTTT GTGATTTCAT TAGGCGGTGG CTCACCCCAC
GATTGCGCTA AGGGTATTGC CCTAGTTGCC ACCAACGGCG GCAGCATCAA AGACTATGAA
GGGTTAGACC AATCTGCTAA GCCACAACTG CCATTAGTGG CCATTAACAC TACTGCTGGC
ACTGCCAGTG AAATGACCCG TTTTTGTATT ATCACTGACG AAGCTCGCCA TATCAAAATG
GCGATTGTCG ACAAACATAC CACCCCATTA CTCTCTGTGA ATGACCCTGA GCTGATGCTG
AAAAAACCAG CTAGCCTCAC AGCTGCAACA GGTATGGACG CGCTGACCCA CGCGGTTGAA
GCCTATGTGT CTATCGCTGC GAACCCTATT ACCGATGCCT GCGCCATTAA AGCCATTGAA
CTTATCCAAG GCAACTTAGT GAATGCGGTA AAACAAGGCC AAGACATTGA AGCCCGTGAG
CAAATGGCCT ATGCGCAATT CTTAGCGGGT ATGGCCTTTA ACAACGCCAG CTTAGGTTAT
GTGCATGCGA TGGCGCACCA ATTAGGCGGT TTCTACGATC TGCCCCACGG TGTGTGTAAC
GCCCTGTTAT TACCCCATGT GCAAGAATAC AACGCTAAAG TGGTACCAGA TCGCTTAAAA
GATATTGCCA AGGCGATGGG TGTCGATGTG GCCAATATGA CGGATGAACA AGGTGCTGCG
GCGGCAATCA CCGCGATTAA GGCCCTATCC GTTGCGGTAA ACATTCCAGA AAACCTGACA
TTACTCGGGG TTAAAGCGGA AGATATTCCA ACGTTGGCCG AAAACGCCTT AAAGGATGCC
TGTGGTTTCA CTAACCCTAA ACAGGCAACC CATGAAGAGA TCTGCCAAAT CTTCACTAAC
GCGTTATAA
 
Protein sequence
MAAKFFIPSV NVLGKGAVDD AIGDIKTLGF KRALIVTDKP LVKIGLVGEV AEKLGQNGIT 
STVFDGVQPN PTVGNVEAGL ALLKANQCDF VISLGGGSPH DCAKGIALVA TNGGSIKDYE
GLDQSAKPQL PLVAINTTAG TASEMTRFCI ITDEARHIKM AIVDKHTTPL LSVNDPELML
KKPASLTAAT GMDALTHAVE AYVSIAANPI TDACAIKAIE LIQGNLVNAV KQGQDIEARE
QMAYAQFLAG MAFNNASLGY VHAMAHQLGG FYDLPHGVCN ALLLPHVQEY NAKVVPDRLK
DIAKAMGVDV ANMTDEQGAA AAITAIKALS VAVNIPENLT LLGVKAEDIP TLAENALKDA
CGFTNPKQAT HEEICQIFTN AL