| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2758 |
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| Symbol | |
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| ID | 4253329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3299150 |
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| End bp | 3301387 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119393 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_734886 |
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| Protein GI | 113971093 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACTC AAGCCCAGAC TTACTTCTAT GACGGTAGCG ATGTCGCGCT GTTAAACGGT
CAATATACGG ATGTGTTTTC CCTGCTTGGT ATGCACAGCA TCAACGAGGG TAAGGCCTTG
GTGGTGCGCT GTTTTTTACG CAACGCCCAA AAGGTTGATG TGATAAGTCT TAAGGATGGC
CGTAAGGTAG CGAGCCTTGA GCGCGTCAAT GAGGCGGGGC TGTTTGCGGG CACGCTTGGC
AGACGGGTTA AGCCCTTTTT GTATGCGCTA CGGGTGGTTT ATCCCCTCTG CGAGCTGGAT
ATTATCGATC CCTATCAGTT TGGCTCCCTC CTCGATAGTC AGGACTTATA CCTCTTTGGC
GAAGGAAGCT CTGAGCAGGC CTATCGCTTT TTAGGTGCGA ACTGGCGCCA AGTCGATAGC
GTCGAAGGCG TGCATTTTTG CGTATGGGCA CCCAATGCTA AGCGGGTTTC TGTGGTGGGG
GATTTTAACC ACTGGGACGA TACTCGCCAT GTGATGCGCC AACATATGGC CAACGGCTTA
TGGGAGATTT TTCTGCCTGA TGTTGCCGAA GGCACGCACT ATAAATTTGA TTTGGTTTAT
CAAAATGGCG AGCGCCACGC CAAATCCGAC CCTATGGCGA CCCAAATGGA ATGTGCACCG
CACAATGCCT CCATAGTGCC GAAAAAACAC CAACATCCTT GGGCAGATAC ACAATGGATG
CACAAACGGG CGACCACAGC TTGGCATCGC GCCGCTATGT CTATCTACGA AGTGCAGCTA
GGCTCTTGGC GCCGAAAAGG TGAGTTTGGT GAGCAATATT TTGATTATCA AGACTTAATT
GAGCAATTGA TCCCCTATGT GAAGGAGCAA GGTTTTACCC ATATCGAGTT GATGCCAGTC
AGTGAGTATC CCTTCGACGG CTCTTGGGGG TATCAACCCG TTGGCCTGTA CGCGCCGACC
CATCGTTTTG GCGATGCCAA TGGCTTAAAG GCCTTTATCG ATGCCTGCCA TCAGGCCGAG
ATTGGCGTGT TACTCGATTG GGTCGCGGCG CATTTCCCTA AGGATCCCCA CGGCCTTGTG
CGTTTCGATG GCACTTGTCT CTACGAACAT GAAGACCCGC GCAAAGGCAC GCACCCCGAT
TGGGATACGT TGATCTATAA CTACGACCGC GGTGAGGTGC GAAGCTTTCT GCTCAGCAAT
GCCTGCTATT GGCTGCGGGA ATTTCACCTC GATGGGCTAA GGCTCGATGC GGTGTCATCC
ATGTTGTACC TCGACTACAG CCGTGAACCT GGACAGTGGC TGCCCAATGC CTATGGCGGA
CGGGAGAATT TAGAGGCGAT TCATTTTCTG CAAATGTTGA ATCAACGTTT GTATCAAGCC
TTCCCAGGCA TTTGCATGAT AGCTGAAGAG TCGACCGCCT TTGCGGGGGT GACTAAGCCG
ACGGATAGCG GCGGGCTGGG GTTTGGTTTT AAGTGGAATA TGGGCTGGAT GAACGACAGC
CTAAGCTACT TAGGCCGCGA TCCCATCTAT CGCCAGTATC ACCATAACCA GCTGACCTTT
AGTTTGATGT ATGCCTATTC GGAGCAATTT ATGCTGTCGA TAAGCCACGA TGAAGTGGTG
CACGGCAAGG GCTCTTTGTT GCATAAAATT CCCGGCGATG ATTGGCAAAA ATTTGCCACC
CTCAAGGCCT ATTACGGCTT TATGTGGGGG CATCCAGGCA AAAAACTGCT GTTTATGGGC
AGTGAGTTCG CCCAGCGCGA CGAATGGAAC CATAACCATA GCCTCGATTG GCATTTGCTC
GCCTTCGAGC CTCACCAAGG CGTGCAGCGC TGGCTTCGCG ATCTGAATCA GCTTTATCGC
CAATTCCCCG CCTTATCCGT GCTCGACTAT GAGTCACAAG GTTTTCGCTG GCTCGATTGT
GACAATGGCC GCGACAGTAT TTTTAGCTTT GTTCGCTATG GCGAGGGCAG TGATGTGCCC
TTAGTGTTTG TGGTGAATAT GACGCCCACT CTGCACCAAG GATTTCGTAT CGGCTTGCCC
CAAGGCGGGG ATTTCTGTGA GTACCTCAAT AGCGACAGCC ATCTCTATGG TGGCAGCAAT
CAGGGGAATG CGGGCAAGGT GATTGCCGAA GATTTACCTT GGCAGGGCAT GGCATCGAGC
GCGTTGATCA CTGTGCCGCC CCTGGGGTGC TTAATCCTCG GGCCTGCGAC GGATGCGCCA
AGAGATACCA GCCTATGA
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| Protein sequence | MMTQAQTYFY DGSDVALLNG QYTDVFSLLG MHSINEGKAL VVRCFLRNAQ KVDVISLKDG
RKVASLERVN EAGLFAGTLG RRVKPFLYAL RVVYPLCELD IIDPYQFGSL LDSQDLYLFG
EGSSEQAYRF LGANWRQVDS VEGVHFCVWA PNAKRVSVVG DFNHWDDTRH VMRQHMANGL
WEIFLPDVAE GTHYKFDLVY QNGERHAKSD PMATQMECAP HNASIVPKKH QHPWADTQWM
HKRATTAWHR AAMSIYEVQL GSWRRKGEFG EQYFDYQDLI EQLIPYVKEQ GFTHIELMPV
SEYPFDGSWG YQPVGLYAPT HRFGDANGLK AFIDACHQAE IGVLLDWVAA HFPKDPHGLV
RFDGTCLYEH EDPRKGTHPD WDTLIYNYDR GEVRSFLLSN ACYWLREFHL DGLRLDAVSS
MLYLDYSREP GQWLPNAYGG RENLEAIHFL QMLNQRLYQA FPGICMIAEE STAFAGVTKP
TDSGGLGFGF KWNMGWMNDS LSYLGRDPIY RQYHHNQLTF SLMYAYSEQF MLSISHDEVV
HGKGSLLHKI PGDDWQKFAT LKAYYGFMWG HPGKKLLFMG SEFAQRDEWN HNHSLDWHLL
AFEPHQGVQR WLRDLNQLYR QFPALSVLDY ESQGFRWLDC DNGRDSIFSF VRYGEGSDVP
LVFVVNMTPT LHQGFRIGLP QGGDFCEYLN SDSHLYGGSN QGNAGKVIAE DLPWQGMASS
ALITVPPLGC LILGPATDAP RDTSL
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