| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2757 |
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| Symbol | |
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| ID | 4253328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3296895 |
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| End bp | 3299153 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119392 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_734885 |
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| Protein GI | 113971092 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC CTGTGCCTGT AAATGCTGAT GGCTCAACCG CCTATAACCT AAGCGCGGGA
CAGCCCTTCC CATTGGGGGC GACGGTCGAT GATGGTGGGG TGAATTTCGC CCTGTTTTCA
GCCCATGCCA CTGGGGTGGA GTTATGTCTG TTTGATGCCC AAGGCGAGGT GGAAACTCAG
CGCATCCCCT TGACAGAGCA GACCCAGCAG ATCTGGCATT TGTATGTGCA TGGGCTCAGT
GCCGGCCAGC TTTATGGCTA CCGTGTTTAT GGTCCCTACG AGCCGCAATT AGGCCACAGA
TTTAATCCGC ATAAGTTGCT GTTAGACCCC TACGCTCGCC AGCTCGTGGG ACGCTATCAC
CACCATATCG CCAATTTTGG TTATGAGATT GATAATCCCA ACGAGGACTT ATCTTTCAGC
ACCTTAGATA ACGCAGATTT TGTACCTAAG TGCAAAGTGG TCGATACTCG GCCCCTTTTT
GATGCCGCTA AGGCCCATAC TATTCGGCCG CTCTCAAGCA AGCGTGAGCC ATTGCCACTT
GAGCAGTGCA TTATCTATGA GATGCACTTA AAGGGATTTA CCGCGCTGCA CCCTGAGATA
GATGCGCCGC TGCGTGGCAC CTTTGCCGGG CTGGCATCGA ATGCCGCGAT AGATTACTTA
GTTAATCTCG GCGTAAATTG CGTCGAGTTA CTGCCGGTTC AGGCATTTTT TTCCGAGCCC
TTTCTACTTG AAAAACAGCT CTCTAACTAT TGGGGTTATA ACAGCGTAGG CTTTTTTGCG
CCTGAGCCGA GTTATCTCTC GAGTGAAGAT ATTGGTGAGT TTCGCACTAT GGTGGATGCG
CTACACGGTG CGGGTATCGA AGTCATTCTC GATGTGGTCT ATAACCACAG CGCCGAGGGC
AGTCGCCTCG GGCCGACCTT TAGCTTTCGC GGTATCGACA ATCTGAGCTA TTACCGCCTG
CATCCAAACG ATAAACGCTT TTATATCAAC GATACCGGTT GTGGTAATAC CTTAAACCTC
AACCATCCGC GCATGTTGCA GTTAGTGCTA GATTCCCTGC GTTACTGGGT CGAAGTGATG
GGCGTCGATG GCTTTCGCTT CGATTTAGCC GCCTGTCTTG GCCGTGAAGC CTATGGATTT
GATCCCGGAA GTGGTTTTTT TGATGCGCTG CTGCAAGACC CTGTGTTGTG CCGGGTGAAG
CTGATTGCCG AGCCTTGGGA TATTGGCCCG GGTGGGTATC AGTTGGGTAA TTTCCCGGTG
GCTTTTAGTG AGTGGAATGA CAGATACCGC GACACCATGC GGCGTTTCTG GCGGGGCGAT
CACGGCATGT TGCCCGAGTT TGCGCGGCGA TTTCATGGCT CGGGGGATTT CTTTGAGCAT
AGCGGCCGAC CTCCTGCCGC CAGTATCAAC TTTTTAACCA GTCACGATGG TTTTACCCTC
AAAGATTTAG TGAGTTATTG CGAGCGGCAC AATTGGGCTA ACGGTGAAGA AAACCGTGAT
GGCCACCATG AGAACTTCAG TCATCACTAT GGGGTCGAGG GCGACACTGA TGACGCCACC
ATTCTCGCGC TGCGCGCCCG CCAGCAACGT AATCTATTGA CCACATTATT CTTATCCCAA
GGGGTGCCTA TGTTACTCAG CGGAGATGAA ACGGGCCGTA CCCAAGGCGG GAATAATAAC
GCCTATTGCC AAGATAACCC CTTGAATTGG TTTGATTGGT CATCGGATGG CATGGATAGT
TCATTGCTGA GTTTTACCTC GCAGTTGATT GCTTTACGCA AACGCTTCCC GCTCTTGTGT
TCCAAACGTT TTATCCATGA GCAGCTAGTG GCCAATGCCT TCGATTGGTC GTCCGAGTCA
TCTTCAAGCC ATGCTGTAAG CCCTGCCTCA ACCCCAACGG GGGCGAGGTT GGATTGGTTT
AGCCGCCAAG GTGAGCCGAT GAGCAAAAGC CTGTGGAGCG AGTCCATGGG CCGCAGCCTC
TGCGTGGTGT TATCGGGCAA TTTAACCGCC ACTCAACCAC AGACTCAGGG TGACAACCTT
CAAGCACTGC TGTTGATGGT GAATGCCGAT GAGCATCCCT TAGCCTTTAC CCTGCCGGTT
TTTGACGGTT TAGGGCCGTG GCAATGCCTG CTGCATACCC AAACAGACCC CCAATTTTTA
ACTCCCACTG AGCCGCTGGA TGCTCAGTCC TCACCGACGC GGTACTTGTT ACAGGATCGC
AGTCTTATGC TGTTTCATGC TGATTTTATA AGGAATTAA
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| Protein sequence | MTNPVPVNAD GSTAYNLSAG QPFPLGATVD DGGVNFALFS AHATGVELCL FDAQGEVETQ
RIPLTEQTQQ IWHLYVHGLS AGQLYGYRVY GPYEPQLGHR FNPHKLLLDP YARQLVGRYH
HHIANFGYEI DNPNEDLSFS TLDNADFVPK CKVVDTRPLF DAAKAHTIRP LSSKREPLPL
EQCIIYEMHL KGFTALHPEI DAPLRGTFAG LASNAAIDYL VNLGVNCVEL LPVQAFFSEP
FLLEKQLSNY WGYNSVGFFA PEPSYLSSED IGEFRTMVDA LHGAGIEVIL DVVYNHSAEG
SRLGPTFSFR GIDNLSYYRL HPNDKRFYIN DTGCGNTLNL NHPRMLQLVL DSLRYWVEVM
GVDGFRFDLA ACLGREAYGF DPGSGFFDAL LQDPVLCRVK LIAEPWDIGP GGYQLGNFPV
AFSEWNDRYR DTMRRFWRGD HGMLPEFARR FHGSGDFFEH SGRPPAASIN FLTSHDGFTL
KDLVSYCERH NWANGEENRD GHHENFSHHY GVEGDTDDAT ILALRARQQR NLLTTLFLSQ
GVPMLLSGDE TGRTQGGNNN AYCQDNPLNW FDWSSDGMDS SLLSFTSQLI ALRKRFPLLC
SKRFIHEQLV ANAFDWSSES SSSHAVSPAS TPTGARLDWF SRQGEPMSKS LWSESMGRSL
CVVLSGNLTA TQPQTQGDNL QALLLMVNAD EHPLAFTLPV FDGLGPWQCL LHTQTDPQFL
TPTEPLDAQS SPTRYLLQDR SLMLFHADFI RN
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