| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2756 |
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| Symbol | |
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| ID | 4253327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3294379 |
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| End bp | 3296892 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638119391 |
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| Product | glycogen/starch/alpha-glucan phosphorylases |
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| Protein accession | YP_734884 |
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| Protein GI | 113971091 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCATA ACAGTGAGCT GAGCCCAAAT ACCAGCGGCG TTCCCCCAAA AAAACGTGCC
ACTAAGGCCG CGCCGAGTCA GCCAAAAGCG ACACTCGACC CCTGCGAGCC CTGTGATGCC
CTGCCCGCGA CCTTTAATCG CCATGTGCGT TACGGTTTAA GCCGCGGCGA AGTGGCTCAC
GGTGAGTTAT TTCAAGCGCT GGCACTCAGC GTTAAAGAAC AAATGTTGGA TGAGTGGCGT
GAGACGCGGA TAAAAGATAG CTGCTATGAC AACAAGCAAG TGGCCTACTT ATCGCTGGAG
TTTCTCATGG GCAGGGCATT AGGTAATGCC TTGTTAAATT TAGATTTAGA GCAAGACAGC
CGCGAGGCGC TTAGCCAATA TTCCGTGTCT CTTGAGGAGC TTGAAGAGGC CGAACACGAC
GCAGGGTTAG GCAATGGTGG CCTTGGGCGA CTCGCCGCGT GTTTTCTCGA TAGCTGCGCC
AGCATGGATT TATCCGTCAC GGGTTATGGC ATTCGTTACG AATACGGCAT GTTCGCCCAG
AAGATAGTCG ATGGCTATCA GGTGGAGCGC CCAGATCGCT GGCTGCGGGA GGGCAACCCC
TGGGAGGTAC GCGTTCCGCA CCATAATGTG ACGGTAAAGT TCTTCGGTCA CACCGAATCC
TATGTCGATA AACAAGGGCG CAGACACATG ATTTGGGTCG ACACTCAAGA TGTGCTCGCC
GTGGCCTATG ACATGCCCGT GCCCGGTTAT CGCAATGGCC GGGTGAATAG CCTCAGACTC
TGGAAAGCCG AAGCGACGGA TGACTTTGAT TTAGCAGAGT TTAACCAAGG GGATTACACA
GAGGCGGTGG CGTGCAAGAA CCTCGCTGAA CAAATCACTA TGGTGCTGTA CCCCAACGAT
GCTAGCGAAA ACGGTAAAGA GCTGCGGTTG CGTCAGCAGT ACTTTTTGTC CTCCGCCAGC
CTGCAGGCAA TTTTAAAACG TTGGGTGCAT CACCACGGTC ATGACTTCAG CGATTTTGCC
GCGAAAAATG TGATCCAACT GAATGACACT CACCCCAGCA TTGCCGTCCC CGAATTAATG
CGGCTGCTGG TGGATGAATA TGGCCTCGAA TGGGACGCCG CCTGGGCGAT TACCAGCCAG
ACTATGGCCT ATACCAATCA CACATTGTTG CCCGAGGCGT TAGAGCGCTG GCCCGTGCGT
ATGATGGCGC TGATGTTGCC GCGAATTTTA GAAATCATCT ATGAAATCAA CGCCAGATAC
CTAGATTTAG TTGCCCACCA CTGGCCGGGA GATGGCGCCA AACTGGCCAG CATGTCGATC
ATTCAAGATG GCCCCGATCC CCATGTGCGC ATGGCGTACC TAGCCATAGT GGCGAGCTTT
TCAGTAAACG GTGTGGCGGC GCTACATACC CAGTTATTAA AGTCGGGCCT GTTTAAGGAT
TTTTATAGCC TGTGGCCAGA GAAGTTTAAC AATCGCACCA ATGGCGTGAC CCCAAGACGT
TGGTTAGCCC ACTGCAATCC CGCTCTCGCC AAACTGTTAA CTAGCCATTT AGGCAAGGGC
TGGGTGACGG ATTTAAGCCA GTTGACGGCG CTCAATGCCT TAACCCAGGA CGCTAGCTTT
ATTCAAAAGT GGCGTGAGGT GAAACAAGCC AACAAGGTGC AACTCGCCAA GATGATCGCC
AAGGAATGTG GCGTCGAGTT TGACCCTGCA ATGCTGTTTG ATGTGCAGGT TAAACGGATC
CACGAGTACA AGCGTCAGTT ACTTAATATT CTGCATGTGA TCCATCTCTA CCATCAAATC
CAGCAGGGGC ACACAGAGCA CCTAGTGCCA CGCTGCGTGC TGATCGGTGG TAAGGCGGCG
CCCGGTTATT TTATGGCGAA GCTCATCATC AAACTCGCCA GTAATGTCGC CCATATGGTC
AATTGCGATC CTGTGGTGGC GCCTTATCTT CGCTTTGCGT TTCTGCCGAA TTACAACGTC
AGTGCCATGG AAAAAATCTG CCCCGGCACC GACGTCTCCG AACAAATCTC CACCGCGGGT
AAGGAGGCCT CGGGTACGGG CAATATGAAG TTCATGATGA ATGGCGCACT CACCATAGGC
ACCTTGGATG GCGCCAATAT CGAGATGCTC GAAGAGGTGG GCGAGGATAA CTTTTTCCTC
TTTGGCCTCA ACGCCGAGCA AGTGACCCAG ATGCGCTGTG ATTACCAACC GCAGCGGATT
ATCGCCGAGT CTCACGCCTT ATCCGAAGTC ATGGCCTTAC TCAAGAGCGG CCATTTTAAC
CTGCTGGAAC CGGGGATTTT CGATCCCATT ATTGCCTCGA TTGAAAGCGC GGATGATCAG
TGGATGACGG CGGCGGATTT CGACAGTTAT CGCCTCGCCC AAGAGGCTGT GGCTAAGGCC
TATAAAGATC CGAAAAAGTG GACGCAAATG AGTATTCGCA ACACGGCGGC CAGTGGTCGC
TTCTCCAGTG ATGTGACGAT TGCTGGCTAT AGAGATGATA TTTGGAAACT GTAA
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| Protein sequence | MSHNSELSPN TSGVPPKKRA TKAAPSQPKA TLDPCEPCDA LPATFNRHVR YGLSRGEVAH
GELFQALALS VKEQMLDEWR ETRIKDSCYD NKQVAYLSLE FLMGRALGNA LLNLDLEQDS
REALSQYSVS LEELEEAEHD AGLGNGGLGR LAACFLDSCA SMDLSVTGYG IRYEYGMFAQ
KIVDGYQVER PDRWLREGNP WEVRVPHHNV TVKFFGHTES YVDKQGRRHM IWVDTQDVLA
VAYDMPVPGY RNGRVNSLRL WKAEATDDFD LAEFNQGDYT EAVACKNLAE QITMVLYPND
ASENGKELRL RQQYFLSSAS LQAILKRWVH HHGHDFSDFA AKNVIQLNDT HPSIAVPELM
RLLVDEYGLE WDAAWAITSQ TMAYTNHTLL PEALERWPVR MMALMLPRIL EIIYEINARY
LDLVAHHWPG DGAKLASMSI IQDGPDPHVR MAYLAIVASF SVNGVAALHT QLLKSGLFKD
FYSLWPEKFN NRTNGVTPRR WLAHCNPALA KLLTSHLGKG WVTDLSQLTA LNALTQDASF
IQKWREVKQA NKVQLAKMIA KECGVEFDPA MLFDVQVKRI HEYKRQLLNI LHVIHLYHQI
QQGHTEHLVP RCVLIGGKAA PGYFMAKLII KLASNVAHMV NCDPVVAPYL RFAFLPNYNV
SAMEKICPGT DVSEQISTAG KEASGTGNMK FMMNGALTIG TLDGANIEML EEVGEDNFFL
FGLNAEQVTQ MRCDYQPQRI IAESHALSEV MALLKSGHFN LLEPGIFDPI IASIESADDQ
WMTAADFDSY RLAQEAVAKA YKDPKKWTQM SIRNTAASGR FSSDVTIAGY RDDIWKL
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