| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2752 |
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| Symbol | |
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| ID | 4253323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3286620 |
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| End bp | 3288005 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638119387 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_734880 |
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| Protein GI | 113971087 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG ACACACTCGG CTTATCTTCC CCCATTTTGA ATGCGATAGC TGAGTGTGGC
TATCAGCAAC TCACGCAAGT GCAGCAGCAA GTGATCCCCT TAGCTCTCGA GGGGAAAGAC
ATTATGGCCT GTGCCCAAAC GGGAACGGGT AAAACCGCTT CTTTTGCATT ACCCGTACTC
GAGCAACTGT CAAAGCAGCC TAGCGATAAA CCCTTGTTGC GTGCTTTAGT GATGACGCCT
ACTCGTGAAC TGGCGATTCA AGTGTGCGCT AATATTCAAA AATATAGTCA GTTCCTCCCC
CTGAAAACCT TAGCGGTTTA TGGCGGCGCG AACATGAATC CCCAGCGTAA AGGGGTGGAG
CAGGGCGTTG ATATCCTCGT CGCGACACCG GGACGACTCT TCGACATTAT TGGTCAGTTC
AATTTAGATC TGTCCACAGT GACCACCTTA GTGATCGACG AAGCGGATCG TATGCTCGAT
TTAGGCTTTG TGCGCGACAT TGAAAAGGTG AAGCGTCTTA TTGCGACGGA ACATCAAACC
ATGTTGTTTT CAGCCACCTA CAGCGATGCG GTCAAGCAAC TTTCCCATAA GATGCTCAAT
CAACCCGAGT GGGTTAACGT GGCCGAAAAT GCCACTGCAT CCACCGTTGA GCAGTTGGTC
TATCGAGTCG ATAAACGCCG CAAGGCCGAA TTATTGTCAG AGCTTGTCGG GCGCAACAAT
TGGCGTCAGG TGCTGGTGTT TGCCAGCACT AAGGAATGCG CCGAGCATCT ATTGCAGGAA
CTCACTCTCG ATGGGATCAG TGCGGGCGTG TTCCACGGGG ATAAAACCCA AGGCGCGCGT
AATCGCGTGC TCGATGATTT TAAAGCGGGC AAATTGCGAG TGCTGGTGGC GACCGATGTG
GCGGCGCGCG GCTTAGATAT TCAGGCGCTG CCCTTAGTGA TTAACCTCGA ATTGCCATTC
CTTGCGGAAG ACTATGTTCA CCGTATTGGC CGTACTGGCC GCGCGGGACT CTCGGGCCGC
GCGATATCAT TTGTGTCCCC CGCCGATGAT GAGATGCTAG CCGAGATTGA AGCCTTAATC
GGCCAAACTT TGCCGGTCAC AGTGCAGCCT GGTTATGAAG AAGGCACGCC GCTGCCTGCG
CGTTACCGTG AGGCGCCGAC GGCAACCACT AAGACCGCTA AGTGGAATTA CAAGAGCAGT
CGCAATACGG GGGCTAAAGG CGCGGGCGGC AATGGCACTA AAGCTAATGG CGCGCGGGGC
AAGAGCGGCT TTGGCGGCAA CGCCGGATTT GGTCAATCGA GCGAAAGCCA AGCGCGGGCG
CGTAAATCGC CAGCCCGTGA AGGTAAATAC GCTAAAAATA AGCCGAATAC TCAAAAGGGT
AAATAA
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| Protein sequence | MKFDTLGLSS PILNAIAECG YQQLTQVQQQ VIPLALEGKD IMACAQTGTG KTASFALPVL
EQLSKQPSDK PLLRALVMTP TRELAIQVCA NIQKYSQFLP LKTLAVYGGA NMNPQRKGVE
QGVDILVATP GRLFDIIGQF NLDLSTVTTL VIDEADRMLD LGFVRDIEKV KRLIATEHQT
MLFSATYSDA VKQLSHKMLN QPEWVNVAEN ATASTVEQLV YRVDKRRKAE LLSELVGRNN
WRQVLVFAST KECAEHLLQE LTLDGISAGV FHGDKTQGAR NRVLDDFKAG KLRVLVATDV
AARGLDIQAL PLVINLELPF LAEDYVHRIG RTGRAGLSGR AISFVSPADD EMLAEIEALI
GQTLPVTVQP GYEEGTPLPA RYREAPTATT KTAKWNYKSS RNTGAKGAGG NGTKANGARG
KSGFGGNAGF GQSSESQARA RKSPAREGKY AKNKPNTQKG K
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