Gene Shewmr4_2741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2741 
Symbol 
ID4253312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3273063 
End bp3274172 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content47% 
IMG OID638119376 
Producthypothetical protein 
Protein accessionYP_734869 
Protein GI113971076 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA ACGAATTAAT CGCGATTGAA AATCGTATCG TCACTAAGTT TTTGGACATG 
TTTATTAAGT TTGGCATGCT CCTAGCGCTA GCGTCCTTCT GCTACACCAT CTTCTCCCCG
TTTTTAAATA TAATGCTCTG GGCTGTCATT TTAGCCGTGG TCATTTATCC CTTTCATCAA
CGTATCGCCA AGCGACTTAA TGATAAGCAG GGCCGAGCCG CTACTTTATT GATTGTAGTA
GGGTTAATGG TATTAGTTTT ACCTACCATT ACTATGGTTA GTTCCATGAC CGATAATATG
GGTAGCTTGG TTGAACGCGT CAATCAAAAC ACCCTTGAAG TCCCCGCACC AAAGGAAAGC
ATTGCCAATA TTCCCTTTGT TGGAGCAAAA ATTTATGACG TTTGGCAGAA AGCATCGACC
GATTTACCCT CGTTAGTCAA AAGTTTACAA CCGCACTTAG GCGAAGTAAC AAAGCAAGTC
ATTCATGCAT TGGCGAGCAT CAGTGGCAGT TTATTGATGA GCATGTTTTC CTTCATCATC
GCTGGCATCA TGATGGCGTA TGGCCGCGCT GGTGCACAAA GTTCTGCTCG TATCGCCACT
CGGATTGCTG GCCCTGAGCG CGGTGCAAAA CTGATCAACA TATGTTCGAC AACCATTCGC
GCCGTGGCCC TTGGTGTCAT AGGTGTTGCC TTTATTCAGG CATTGCTGGT CGGTATTGTT
ATGACCCTTG CTGGTATCCC TTTGGTGGGT ATCTTCTTTA TCTTGGTCTT GGTATTAGGG
ATTGCACAAG TTCCCGCGCT ATTAGTGACT CTTCCAGCGA TAGCTTATAT CTGGATGACT
GGCGACAACG GCACGGTAGG CAGCATTATC TATACAGTGT TGCTGATTCT TGCGGGTGCG
GTGGATAACG TGCTCAAACC CATACTGTTG GGCCGCGGAG TCGATGCCCC CATGCCTGTC
GTTCTGATAG GAGCCCTCGG TGGTATGGCT ACCAGCGGGA TCTTAGGGAT GTTTATCGGC
GCTACGCTCC TGTCTATCGG CTATCGCATC TTTATGGCTT GGGTGGACGA AGGTCTCGAA
GAGCCGTTGA GAGAGCAAGA TGATAATTGA
 
Protein sequence
MENNELIAIE NRIVTKFLDM FIKFGMLLAL ASFCYTIFSP FLNIMLWAVI LAVVIYPFHQ 
RIAKRLNDKQ GRAATLLIVV GLMVLVLPTI TMVSSMTDNM GSLVERVNQN TLEVPAPKES
IANIPFVGAK IYDVWQKAST DLPSLVKSLQ PHLGEVTKQV IHALASISGS LLMSMFSFII
AGIMMAYGRA GAQSSARIAT RIAGPERGAK LINICSTTIR AVALGVIGVA FIQALLVGIV
MTLAGIPLVG IFFILVLVLG IAQVPALLVT LPAIAYIWMT GDNGTVGSII YTVLLILAGA
VDNVLKPILL GRGVDAPMPV VLIGALGGMA TSGILGMFIG ATLLSIGYRI FMAWVDEGLE
EPLREQDDN