| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2738 |
|---|
| Symbol | |
|---|
| ID | 4253309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 3270354 |
|---|
| End bp | 3270923 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638119373 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734866 |
|---|
| Protein GI | 113971073 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1556] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGTA AGCACGAAAT TCTCAATGCG CTCAAACTGT CGGCTTTAAC AAACCATCCT
ATGCCAAGCA TCGATGTCAC CCCGCGGGTG GAAGATCTGG TAGGTCAGTT TGAAACCAAT
CTAAAAACCG TGGCCGGCAC ACTGCACCGC GAAGGCGGCC TAGCCGCACT GCAAGCCAAA
GTGGATGAGC TTGTCGCCCA AGGCTTGCAG GTCATCTCAC TGGTTGAAGG CGTCACGGCA
AATCGTGAAG TACCACCAAC GGCACACGAG CTCAGGGATA TCGATTATGC AGTGATCCCA
GGAGACGTTG GCGTTGCCGA AAATGGTGCC ATTTGGGTCA ACAACAAGAA CTTAGGCCAC
AGAGTAACAC CTTTTATCTG TGAAAACCTG ATCTTAGCGC TACCTAGCAC TAAGATTGTG
CCGAACATGC ATCAAGCAGC CAAGGACATT ACCTTAGATG CGGGTGAGTT TGGCGTCTTT
ATCGCAGGCC CTTCAAAAAC CGCCGATATC GAGCAAGCCC TCGTCGTCGG TGCCCACGGT
GCCTGTAGCT TAAATGTGTA TCTGGTTTAA
|
|---|
| Protein sequence | MSSKHEILNA LKLSALTNHP MPSIDVTPRV EDLVGQFETN LKTVAGTLHR EGGLAALQAK
VDELVAQGLQ VISLVEGVTA NREVPPTAHE LRDIDYAVIP GDVGVAENGA IWVNNKNLGH
RVTPFICENL ILALPSTKIV PNMHQAAKDI TLDAGEFGVF IAGPSKTADI EQALVVGAHG
ACSLNVYLV
|
|---|
| |