| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2734 |
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| Symbol | |
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| ID | 4253305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3263388 |
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| End bp | 3265034 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119369 |
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| Product | L-lactate permease |
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| Protein accession | YP_734862 |
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| Protein GI | 113971069 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.718337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATAC TTCAACTCCT CGCCAGCTTG ACGCCAGTGA TCAGTGTAAT GATCTTTCTC
GTATTACTGA GAATGCCCGC GTCCAAAGCT ATGCCTATAT CCATGATAGT CACGGCGCTC
GCCGCCGTGT TTATTTGGCA GATGGACACT ACCCTGTTAG CCGCATCGGT TCTCGAAGGC
CTACTGTCAG CCATCACGCC ATTAAGCATC ATCTTCGGTG CGGTATTCCT ACTCAACACC
CTGAAATACT CAGGAGCGAT GGATACCATC CGCGCGGGCT TCACTAACAT CAGTGCCGAT
GCCCGTGTCC AAGTGATTAT TATCTGTTGG TTATTCGGTG CCTTTATCGA AGGTAGTGCA
GGCTTTGGTA CCCCGGCTGC GATTGGTGCC CCTCTGCTGG TATTACTGGG GGTTCCACCC
GTTGCCGCCG CCGTTGTGGC ATTGATTGCC GACTCGGCCA GCGTGTCATT CGGTGCTATC
GGTTTACCTG TGCTGTTTGG TATGGAACAA GGCTTAACTC AAGGTGGTGT GAGCATGGCT
GCGGCACAAA TTGCCGAGCA TGGCGGTACT TACCCTGATT TTGCCCAGTT CATTGCAATG
CATATGATCA CTATCGACTT AATCACTGGT ACCTTAATTC CACTGGTGAT GGTATCGATT
CTGACAGGCT TTTTCGGCCG TAATAAATCC TTTAAAGAAG GTCTAGCCAT TTGGAAGTTT
GCGATTTTCG CAGGTCTTGC CTTTACCGTG CCCGCTTGGA TCATCAACTA TGTTGCAGGC
CCTGAATTCC CATCAGTGAT CGGTTCATTG GTAGGCATGG CCTTAGTGAT CCCCGTTGCC
CGTAAGGGTT ACTTACTGCC TAAAACCCCT TGGAATGACT TTGCCGAAAA TGATAATCAG
GAAGAAGGCG CTAAAATTGA GACGACCACT AAGTTCTCAC AAATCGCCGC TTGGACTCCC
TATATCATCA TGGCTGCACT GTTAGTGTTA TCACGCACAG TTGCCCCACT CAAAGCCTGG
TTATCGAGTT TCAACATTAG CTGGACCGGC CTGATGGGCA CTGAACTTAA AGCGAGCTTT
GCAACACTTT ATGCCCCTGG CGCCTTCTTC GTGGCCGTGT GTATCTTAGG TTTCTTCCTG
TTCAAGATGA AAAGCCCTGC GATTAAGCAA TCTATCGGCG TGTCATGCAA GTCGATGTTA
CCGACTATCA TCTCATTAGG CGCATCCGTG CCTATGGTGA AAATCTTCTT AAACTCTGGT
GCAAACGGTG CGGGCCTCGC GTCTATGCCT GTTGCCTTAG CCGACATGCT GGCCCATTCG
ATGGGCGCAG TGTGGGCATG GATGGCACCG ATTGTGGGGA TCTTCGGCGC CTTCCTTTCA
GGTTCTGCGA CCTTCTCCAA CATGATGTTC TCCGGCCTGC AATACAGTGT TGCCGACAAC
ATTGGCATGA ACCACGCGCT AGTATTAGCA CTGCAAGGTA TAGGTGCTAA CGCGGGTAAT
ATGATGTGTG TAATGAACGT GGTGGCAGCG GCTACCGTTG TGGGTATGGC AGGTAGAGAA
TCTGAAATCA TCCGTAAAAC CATGCCTGTG GCGATTGGTT ATGCGCTACT AGCTGGCACT
ATCGCAACTC TGTGGGGTGG CTTCTAA
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| Protein sequence | MTILQLLASL TPVISVMIFL VLLRMPASKA MPISMIVTAL AAVFIWQMDT TLLAASVLEG
LLSAITPLSI IFGAVFLLNT LKYSGAMDTI RAGFTNISAD ARVQVIIICW LFGAFIEGSA
GFGTPAAIGA PLLVLLGVPP VAAAVVALIA DSASVSFGAI GLPVLFGMEQ GLTQGGVSMA
AAQIAEHGGT YPDFAQFIAM HMITIDLITG TLIPLVMVSI LTGFFGRNKS FKEGLAIWKF
AIFAGLAFTV PAWIINYVAG PEFPSVIGSL VGMALVIPVA RKGYLLPKTP WNDFAENDNQ
EEGAKIETTT KFSQIAAWTP YIIMAALLVL SRTVAPLKAW LSSFNISWTG LMGTELKASF
ATLYAPGAFF VAVCILGFFL FKMKSPAIKQ SIGVSCKSML PTIISLGASV PMVKIFLNSG
ANGAGLASMP VALADMLAHS MGAVWAWMAP IVGIFGAFLS GSATFSNMMF SGLQYSVADN
IGMNHALVLA LQGIGANAGN MMCVMNVVAA ATVVGMAGRE SEIIRKTMPV AIGYALLAGT
IATLWGGF
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