Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2728 |
Symbol | |
ID | 4253299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3256807 |
End bp | 3257574 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119363 |
Product | flagellar motor protein PomA |
Protein accession | YP_734856 |
Protein GI | 113971063 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00881641 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.350024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATTTAG CTACAGTTAT AGGACTAGTC GGGGGCTTTG GTTTTATCCT TTGGGCTATG ATGACCAGCG GCGGCATTGC AATTTTTATC GACGTGCCCT CTATCTTCAT CGTATTTGGT GGTTCTTTCT TCGTCGTCAT GATGAAATTC AATCTGAAAC AGTTTTTCGG TGCGGTAAAA ATCGCCATCA AAGCCTTTAT GTTTAAGATT GATAAGCCTG AAGATCTTAT CGAGCAGTCC GTGACTATGG CGGACGCCGC CCGTAAAGGC GGATTCCTAG CCCTCGAAGA AGCGCAAATT TCCAACAGTT TTATGCAAAA AGCCGTCGAT ATGTTGGTCG ATGGTCACGA TGGCGAAGTG GTGCGTGCCG CACTGGAAAA AGACATTGCC CTCACCGAAG AGCGCCACCG CAATGGGATT GCCATTTTTA GGGCCTTTGG TGACGTTGGC CCAGCTATGG GGATGATTGG TACCCTTGTG GGCTTGGTGG CCATGTTATC CAACATGTCA GATCCAAAAT CGATTGGTCC CTCTATGGCG GTTGCCTTGT TAACCACATT GTATGGCGCC GTGGTGGCTA ACATGGTAGC GATTCCTATC GCCGACAAAC TCACCCTTCG CATGGGTGAA GAAATGCTTA ACCGCAACCT GATTATGGAT GCGGTATTAG CCATTCAAGA TGGCCAAAAC CCACGGGTAA TTGAAGGTTT CTTAAAGAAT TATCTTGCTG AAAAACAGCG GAAAATCGAT ACAACGGACG GAGAGTAG
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Protein sequence | MDLATVIGLV GGFGFILWAM MTSGGIAIFI DVPSIFIVFG GSFFVVMMKF NLKQFFGAVK IAIKAFMFKI DKPEDLIEQS VTMADAARKG GFLALEEAQI SNSFMQKAVD MLVDGHDGEV VRAALEKDIA LTEERHRNGI AIFRAFGDVG PAMGMIGTLV GLVAMLSNMS DPKSIGPSMA VALLTTLYGA VVANMVAIPI ADKLTLRMGE EMLNRNLIMD AVLAIQDGQN PRVIEGFLKN YLAEKQRKID TTDGE
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