Gene Shewmr4_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2728 
Symbol 
ID4253299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3256807 
End bp3257574 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID638119363 
Productflagellar motor protein PomA 
Protein accessionYP_734856 
Protein GI113971063 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00881641 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.350024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTAG CTACAGTTAT AGGACTAGTC GGGGGCTTTG GTTTTATCCT TTGGGCTATG 
ATGACCAGCG GCGGCATTGC AATTTTTATC GACGTGCCCT CTATCTTCAT CGTATTTGGT
GGTTCTTTCT TCGTCGTCAT GATGAAATTC AATCTGAAAC AGTTTTTCGG TGCGGTAAAA
ATCGCCATCA AAGCCTTTAT GTTTAAGATT GATAAGCCTG AAGATCTTAT CGAGCAGTCC
GTGACTATGG CGGACGCCGC CCGTAAAGGC GGATTCCTAG CCCTCGAAGA AGCGCAAATT
TCCAACAGTT TTATGCAAAA AGCCGTCGAT ATGTTGGTCG ATGGTCACGA TGGCGAAGTG
GTGCGTGCCG CACTGGAAAA AGACATTGCC CTCACCGAAG AGCGCCACCG CAATGGGATT
GCCATTTTTA GGGCCTTTGG TGACGTTGGC CCAGCTATGG GGATGATTGG TACCCTTGTG
GGCTTGGTGG CCATGTTATC CAACATGTCA GATCCAAAAT CGATTGGTCC CTCTATGGCG
GTTGCCTTGT TAACCACATT GTATGGCGCC GTGGTGGCTA ACATGGTAGC GATTCCTATC
GCCGACAAAC TCACCCTTCG CATGGGTGAA GAAATGCTTA ACCGCAACCT GATTATGGAT
GCGGTATTAG CCATTCAAGA TGGCCAAAAC CCACGGGTAA TTGAAGGTTT CTTAAAGAAT
TATCTTGCTG AAAAACAGCG GAAAATCGAT ACAACGGACG GAGAGTAG
 
Protein sequence
MDLATVIGLV GGFGFILWAM MTSGGIAIFI DVPSIFIVFG GSFFVVMMKF NLKQFFGAVK 
IAIKAFMFKI DKPEDLIEQS VTMADAARKG GFLALEEAQI SNSFMQKAVD MLVDGHDGEV
VRAALEKDIA LTEERHRNGI AIFRAFGDVG PAMGMIGTLV GLVAMLSNMS DPKSIGPSMA
VALLTTLYGA VVANMVAIPI ADKLTLRMGE EMLNRNLIMD AVLAIQDGQN PRVIEGFLKN
YLAEKQRKID TTDGE