Gene Shewmr4_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2727 
SymbolmotB 
ID4253298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3255883 
End bp3256803 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content51% 
IMG OID638119362 
Productflagellar motor protein MotB 
Protein accessionYP_734855 
Protein GI113971062 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.014691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.192949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGT GCAACTGTCC ACCGCCCGGA GCGCCGCTCT GGTTGGCAAC ATTTGCCGAT 
TTGATGTCCC TCTTGATGTG TTTCTTCGTG CTGCTGCTGT CATTCTCCGA AATGGACGTG
ATGAAGTTTA AGCAGATTGC AGGCTCGATG AAGTATGCCT TCGGGGTGCA AAATAAGGTC
GAAGTCAAAG ATATTCCTAA GGGGACGTCT GTGATTGCTT TGGAGTTTCG TCCTGGCCGC
CCCGATCCCA CGCCGATTGA AATCATTAAC CAACAAACCA ATGAAATGAC TGAACCCGTT
TTGGATTATC AAGCGGGCGA AGACGATAGC GCGGGTGGTG TGCAGCAGCA AAATGGTTCG
CAGCGGGGCG GTGAAGCCTC GGCGACGGCG CAAGAAACGG CGGATGCGGT AAAAGCCGAA
GCCGCAGCGG CGCAGGATAA AATCAATCAG CAAGTGAAGA AAATGGCACA GGAACTCAAT
AATGAGATCA CCGATGGGGC GATCGAAATT GAGTCACTTG GGCAGCAAAT CATTATCCGT
ATCCGTGAGA AGGGCTCATT TGCCTCAGGA TCTGGCTTCC TGCAGCCGCG ATTTAAACCC
GTGGTGCGCT CGGTCGGTGA ATTGCTAAAA GATGTGCCGG GGATCATCAC GGTATCGGGT
TACACCGATG ATATGCAGAT AAGCGATGAG CTTTATAGCT CGAACTGGGA TCTCTCCAGC
AAACGCGCTG TGGCGGTGGC AGATGTGCTG CTGCAAGTGA AGGGCTTCGA TCCTAAGCGG
ATGAAAGTGG TCGGTATGGC GTCGAATAAT CCAATCGTGC CTAATGACTC ACCTGAAAAC
CGCGCACGAA ATCGTCGTGT TGAGATTGCC ATTGAACAGG GTAAAGCCAA AGAATCCGAA
GAAATTCAAG TAGGTAAATA G
 
Protein sequence
MAKCNCPPPG APLWLATFAD LMSLLMCFFV LLLSFSEMDV MKFKQIAGSM KYAFGVQNKV 
EVKDIPKGTS VIALEFRPGR PDPTPIEIIN QQTNEMTEPV LDYQAGEDDS AGGVQQQNGS
QRGGEASATA QETADAVKAE AAAAQDKINQ QVKKMAQELN NEITDGAIEI ESLGQQIIIR
IREKGSFASG SGFLQPRFKP VVRSVGELLK DVPGIITVSG YTDDMQISDE LYSSNWDLSS
KRAVAVADVL LQVKGFDPKR MKVVGMASNN PIVPNDSPEN RARNRRVEIA IEQGKAKESE
EIQVGK