| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2726 |
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| Symbol | |
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| ID | 4253297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3254212 |
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| End bp | 3255666 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119361 |
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| Product | thiamine biosynthesis protein ThiI |
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| Protein accession | YP_734854 |
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| Protein GI | 113971061 |
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| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00293542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.227571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTA TTGTAAAGCT GTACCCAGAA ATCATGATGA AGAGCAAGCC CGTGCGCATG
CGCTTCACCA AAATGCTTGA AACCAACATC CGTAACGTGC TCAAAAAAGT TGATGAAGAT
GCCAAAGTGC AACGTCAATG GGACCGTATT TGGGTAAAGG TGCCAAATGA TAAACCTGAA
TTAGCTCAGG CCTTTGGTGA GCGTTTAGCC TGTATTCCTG GGATCGCCCA TGTGGTGCAA
GTGGATGAAT ACAGCTTTAC CTCAGTCGAC GATATCTACC AGCAAGTCTT ACCCGTTTAC
CGTGACCAAA TTGCCGGTAA AACCTTCTGT GTGCGCGTCA AACGTACTGG CTCCCACGAT
TTTAACTCTA TCGAAGTCGA GCGTTATGTC GGTGGTGGTT TAAACCAGTT TACCGATGCG
ATTGGCGTGC GTTTAAAGAA CCCAGAAGTG ACAGTTAACC TCGAAATCGA GGGCGATAAA
CTGTATATGG TGACTAAGCG TATCGAAGGC TTAGGCGGCT TCCCAATGGC GACACAGGAA
GATGTGTTGT CTTTGATTTC GGGCGGTTTT GACTCAGGCG TGTCGAGCTA CCAATTTATT
AAGAAGGGCG CTCGTACCCA TTACTGTTTC TTCAACCTCG GCGGTGCGCA GCATGAAATT
GGCGTGAAAC AAGTCGCTTA CCATTTGTGG AAAACCTATG GTGAATCCCA CAAGGTGAAG
TTTGTATCTG TGCCGTTCGA GCCTGTGGTG GCCGAGATTT TAGAGAAAAT CGACAACGGT
CAAATGGGCG TGGTGCTCAA GCGTATGATG ATGCGCACCG CGGCGCGTAT TGCCGAGCGT
ATGGGCATTC AGGCGATTGT GACAGGTGAG AGTTTAGGCC AAGTATCGAG CCAAACTTTA
ACCAATTTAA ACGTCATTGA CCGCTGCACC GATATGCTGA TCCTGCGCCC GCTGATCGCC
ATGGACAAGC AGGACATCAT CAACGAATGT CGCCGTATCG GTACCGAAGA TTTTGCTAAA
TCTATGCCTG AATATTGCGG CGTGATTTCG CAAAAGCCAA CCGTGAAGGC GGTACTGGCC
AAGGTTGAGG CCGAGGAGAC TAAATTCTCT GAGGACTTGA TTGACCGTAT CGTTGAGCAG
GCCGTGGTCA TTGATATCAG GGAGATAGCA GAACAAATGA ATACGCGTAT CACTGAAACT
GAAACCGTTG TTGCTATCGA CACCAATGAA GTGGTGATTG ATATTCGCGC CCCAGAGGAA
GAAGAGAACA AGCCGCTAGA GATTGAAGGC GTGGAAATCA AGCGCATTCC TTTCTTCAAA
TTAGCGACTC AGTTTGCCGA TCTCGATAAG CAGAAGACTT ACCTGTTGTA CTGTGAGCGT
GGTGTGATGA GTAAATTACA GGCGCTATAC CTGATTGAGC AAGGTTATCA TAATGTTAAG
GTCTACCGCC CTTAA
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| Protein sequence | MKFIVKLYPE IMMKSKPVRM RFTKMLETNI RNVLKKVDED AKVQRQWDRI WVKVPNDKPE
LAQAFGERLA CIPGIAHVVQ VDEYSFTSVD DIYQQVLPVY RDQIAGKTFC VRVKRTGSHD
FNSIEVERYV GGGLNQFTDA IGVRLKNPEV TVNLEIEGDK LYMVTKRIEG LGGFPMATQE
DVLSLISGGF DSGVSSYQFI KKGARTHYCF FNLGGAQHEI GVKQVAYHLW KTYGESHKVK
FVSVPFEPVV AEILEKIDNG QMGVVLKRMM MRTAARIAER MGIQAIVTGE SLGQVSSQTL
TNLNVIDRCT DMLILRPLIA MDKQDIINEC RRIGTEDFAK SMPEYCGVIS QKPTVKAVLA
KVEAEETKFS EDLIDRIVEQ AVVIDIREIA EQMNTRITET ETVVAIDTNE VVIDIRAPEE
EENKPLEIEG VEIKRIPFFK LATQFADLDK QKTYLLYCER GVMSKLQALY LIEQGYHNVK
VYRP
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