Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2723 |
Symbol | |
ID | 4253294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3252087 |
End bp | 3252758 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119358 |
Product | hypothetical protein |
Protein accession | YP_734851 |
Protein GI | 113971058 |
COG category | [R] General function prediction only |
COG ID | [COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000147001 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0842071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTGTT GCCCGGATAA TCCTTTGGTC AACGAGGATG TTGCTTCAAA CGCCTATGTG TTAGAAGGCG AGCCATCAGA AACCTTGATT TTATTTGCCC ACGGCGCGGG AGCGAATCGA GACTCCGACT TTATGTGCCA AATGGCCGCA GGTCTTGTCG CCAAGGGGTT TCAAGTGATG CGCTTTAACT TTCCCTACAT GCAGGCCAAT GCCGTGGATG GTAAAAAGCG CCCCCCTGAC AGAGCGCCAA AGTTGCTTGC CCGTTTTAGC GAGATGCTCG ATGTGGCGCA CGCTCAGCCT ATGGTTAAGC GTGTGGTCTT GATGGGCAAA TCCATGGGCG GACGCATGGC GGCTTTATTG GCCTGCGATA GTGTGCAAGC GAGCCGTATC GACAGCGTCA TTTGTTTAGG TTATCCCTTT ATTCCGCTTA AGGGCGGTGA ACCTAGGTTA GAACCCCTAA ACGACTGCCA AGTGCCCGTA TTAGTGCTGC AAGGGGAGCG GGATAAGTTT GGCGGTAAGA TGCAAATCCC TAGCTGGCCG CTTAAGCGCG ATATTCAAAT TGAATACTTA GCCGATGGGG ATCATAGTTT TGTCCCAAGA AAGTCGTCAG GCACGACCGA AGCGGCTAAC CTTGCATTGG CTGTTGATTT ATCAGCAAAA TTTATTGGCT AA
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Protein sequence | MSCCPDNPLV NEDVASNAYV LEGEPSETLI LFAHGAGANR DSDFMCQMAA GLVAKGFQVM RFNFPYMQAN AVDGKKRPPD RAPKLLARFS EMLDVAHAQP MVKRVVLMGK SMGGRMAALL ACDSVQASRI DSVICLGYPF IPLKGGEPRL EPLNDCQVPV LVLQGERDKF GGKMQIPSWP LKRDIQIEYL ADGDHSFVPR KSSGTTEAAN LALAVDLSAK FIG
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