| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2717 |
|---|
| Symbol | |
|---|
| ID | 4253288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 3242641 |
|---|
| End bp | 3243069 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638119352 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734845 |
|---|
| Protein GI | 113971052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.858357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0163885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA AAACTTCGGT CATTATTGGT AGCATATTTG CAGCCTATGT CGCCTTCGTT
GCTGTTGTGG TGCTCGTATA CGAACCCACT CCAGATGAAA TGGATTGGGA AGACAGGCAA
GTCTATAACA GCCAAAAATT AAATGAGTTA ACACTCGGAC AGGATATTTC TACCGTTAAG
ACTTTATTTG GCAAAGCCGA CTTTTCAGAG GCGAAATCCA TTAAGGATGG CCAGCTACAA
GTGCTCTTTT ATCGTACTCA CCATGAAAAA TCCGATGGCG TGACCACCAA AGAAGAATGC
ACCCCACTGA TTTTTAAAGA CGATAAACTT GTGGCCTGGG GTGATGATAC CTATAAACAG
TATCTCGAAG CTGGCACCGA TATCGTTAAC CGCACCGCCA AAGAAGCTGA AAGCTCAAGC
AAAAATTGA
|
|---|
| Protein sequence | MKSKTSVIIG SIFAAYVAFV AVVVLVYEPT PDEMDWEDRQ VYNSQKLNEL TLGQDISTVK
TLFGKADFSE AKSIKDGQLQ VLFYRTHHEK SDGVTTKEEC TPLIFKDDKL VAWGDDTYKQ
YLEAGTDIVN RTAKEAESSS KN
|
|---|
| |