Gene Shewmr4_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2711 
SymbolrdgC 
ID4253282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3233358 
End bp3234272 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content46% 
IMG OID638119346 
Productrecombination associated protein 
Protein accessionYP_734839 
Protein GI113971046 
COG category[L] Replication, recombination and repair 
COG ID[COG2974] DNA recombination-dependent growth factor C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000015542 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000164206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGTTTA AAAATCTTAC TCTTTACCGT TTCAATAAAC CTTTTTCCAT CGAGACAGAA 
GCACTTGAAA CCGCACTCGC CGATTTCACA TTTTCCCCAT GCGGCAGCCA AGACGTCAGC
AAATTTGGTT TTTCCAATGC CTTAGGTAAA CAAGGCAGCA CCTTAGTGCA CAGCGCCAAT
AATCGTCACC TTATCTGTGT CACTAAAGAA GAAAAAATTC TGCCAGGCCA AGTGATTAAA
GAATCATTAG AAGAAAAAGT GGCGCTAATT GAAGACGAAG AAAATCGTAA GCTCGCCAAA
AAAGAAAAAG ATGCGCTGAA AGATGAAATC ATCACTAGCC TATTACCACG CGCCTTTTCA
CGTCGCAGCC AAACTCGCGC GCTGATTTTA CCTGAGCTGG AAATGATCCT CGTTGATAGC
TCTAGCGCCA CTAAAGCCGA AGAATTATTA GCCTTATTAC GCAAGGCCTT AGGTAGCTTG
CCAGTGATCC CATTAAGCTT TAAAGCGCCA GTTGAATCGA ACCTCACTCA ATGGTTAAAA
GATGGCAGCG CACCATTACC CTTTGAAATG CAAGATGAAG CCGAGTTGAA ATCGGCCGCC
GATGAAGGCG GTATCGTGCG CTTTAAGCAG CAAGATCTGA AAGAAGATGA AGTACTTGCC
CACCTTGAAA CCGGCAAAGA AGTGCATAAG CTCGCCCTGC ACTTTGGCCA ATCAATTGCG
CTACTGCTGC AATCCGACGC CAGCGTAAAA CGCTTAAAAT TCTCCGAAGA ATTTAGAGCG
GGTAATGATG AGCTAGGTAA TGAAGATCCA ATGGCGCGTC TCGATGCCGA CTTTGCCTTA
ATGGGCAGTG AGTTAGTCGC GCTGATGCAC GCCCTAGTTT CGGCATTAGG CGGCCTTGAA
GAGACTCAAG CTTAG
 
Protein sequence
MWFKNLTLYR FNKPFSIETE ALETALADFT FSPCGSQDVS KFGFSNALGK QGSTLVHSAN 
NRHLICVTKE EKILPGQVIK ESLEEKVALI EDEENRKLAK KEKDALKDEI ITSLLPRAFS
RRSQTRALIL PELEMILVDS SSATKAEELL ALLRKALGSL PVIPLSFKAP VESNLTQWLK
DGSAPLPFEM QDEAELKSAA DEGGIVRFKQ QDLKEDEVLA HLETGKEVHK LALHFGQSIA
LLLQSDASVK RLKFSEEFRA GNDELGNEDP MARLDADFAL MGSELVALMH ALVSALGGLE
ETQA