Gene Shewmr4_2691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2691 
Symbol 
ID4253262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3209497 
End bp3210033 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content54% 
IMG OID638119326 
ProductMarR family transcriptional regulator 
Protein accessionYP_734819 
Protein GI113971026 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00759324 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAAAA AACCGCAATC ACCCGGCGCA AAGCAACAGT CGACTCCCGC TGAAGACGGA 
TTGGATAACA TCCTTGGGCA GTGGCAGGCT CAAGGGGTGA CAGAGGATCT AGTGCCAATG
GCGGTGTTAG GGCGCATCGC GCGCCTGACC AAATATATGG AAAACGCTAT CGCCCTGTGC
CATGGCGAAT TTGGCTTAGG TCAGGGGGAG TTTGATGTGC TCGCGACCCT CAGACGTTCG
GGCGAGCCTT ATATGCTATC GCCTTCGCAG CTGTATCAGA GCATGATGTT AAGCTCTGGC
GCCATGACCA GTCGCTTAGA CCGGCTTGAA AATAAAGGGC TGATTGCCCG TGAGCACAGT
AAGGAAGATC GCCGCGCCGT GCATGTGTCG CTCACCACCG AAGGCAAGGC GTTGATTGAT
GCGGCGCTGC CCAAACATAT TCAATGCCAA AGCGCATTAT TGGCAGGGGT GCCGAGTGCC
GAGCGCGAAA CATTGCAGCA GATTTTAAAG ACGTGGCTTG CTCACTTTGA ACGTTAA
 
Protein sequence
MDKKPQSPGA KQQSTPAEDG LDNILGQWQA QGVTEDLVPM AVLGRIARLT KYMENAIALC 
HGEFGLGQGE FDVLATLRRS GEPYMLSPSQ LYQSMMLSSG AMTSRLDRLE NKGLIAREHS
KEDRRAVHVS LTTEGKALID AALPKHIQCQ SALLAGVPSA ERETLQQILK TWLAHFER