| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2690 |
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| Symbol | |
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| ID | 4253261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3208414 |
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| End bp | 3209427 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119325 |
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| Product | succinylglutamate desuccinylase/aspartoacylase |
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| Protein accession | YP_734818 |
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| Protein GI | 113971025 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3608] Predicted deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.774647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0310451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAAA AGCGCGAAGC GTTTGAAATT GAAGGCAAGC GAGTCATTGC GGGCACGCAA
ATGGGGATAA AACTTCCCGC CGCTAAGCTC TATACCGATA CCCAACTCGA TATTCATGTT
GAAGTGTTCC ATGGCCTCAA ACCTGGTCCG ACACTGTTAG TCTGCGCTGC CATCCATGGC
GATGAGCTCA ATGGCATTGA GATCTGTCGG CGCTTGCTTG GGCGCGTCAA TCCTAAGAAT
TTGGCCGGCA CCCTGATTGT GGTGCCCATA GTCAATGTGT TTGGTTTTAT TCAACAATCC
CGTTATCTCC CCGATAGACG CGATCTTAAT CGTTGTTTCC CCGGCTCGAG CAAAGGTGCG
CTGGCGAGCC GTTTAGCCAA CCTTTTTGCC ACCCAATTAC TGGTGCATGC AACCCATGTG
ATTGATTTAC ATACGGGCGC TATTCATAGG GATAACTTGC CGCAGATCCG CTGCGACACC
GGCGATGCAA CCATGTTAGC CATGGCCAAT GCCTTCGGCG CGCCACTTAT CATGCACTCC
AAGGCGCGCA GCGTGTCGAT GCGTGGCTAT GCGAACCAAC AGGGCATTCC CTGTATTTTG
TATGAGGCGG GCGAGGCGCT GCGCTTTAGT GAACTGGCGA TTAAGTCGGG TCTTAAGGGC
GTACTCAATG TGATGCGAAG CCTTGGTATG CTCAAGGGGC GAGTCAGTAA CAAGGTCGCC
AGTGTCAGCG CAATACGCAG TTATTGGGTT CGCAGTGAGT CCGATGGTTT AGTGAATATG
AAGCTTAAAC TCGGGCAGCG GGTCAATAAG GGGTATATCA TCGCCCATAT TGTGAGTCCG
CATGGGGGCG ATAGCGTAGC CATTCGCGCC CCAACCGATG GCATCATCAT AGGGATCAGC
AATATACCTG TGACCAACGA AGGTGAGGGC ATGTTCCATA TTGCGCAGTT CGAGGGGGAT
GAAATTGAAA TCGCCAACGA ACAACTCGAT GAATTTTTAA TGGAATACGC CTGA
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| Protein sequence | MVKKREAFEI EGKRVIAGTQ MGIKLPAAKL YTDTQLDIHV EVFHGLKPGP TLLVCAAIHG
DELNGIEICR RLLGRVNPKN LAGTLIVVPI VNVFGFIQQS RYLPDRRDLN RCFPGSSKGA
LASRLANLFA TQLLVHATHV IDLHTGAIHR DNLPQIRCDT GDATMLAMAN AFGAPLIMHS
KARSVSMRGY ANQQGIPCIL YEAGEALRFS ELAIKSGLKG VLNVMRSLGM LKGRVSNKVA
SVSAIRSYWV RSESDGLVNM KLKLGQRVNK GYIIAHIVSP HGGDSVAIRA PTDGIIIGIS
NIPVTNEGEG MFHIAQFEGD EIEIANEQLD EFLMEYA
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