Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2689 |
Symbol | |
ID | 4253260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3207739 |
End bp | 3208365 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119324 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_734817 |
Protein GI | 113971024 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.490642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0512054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTG TTAACGTCGG TGATAAACAG ATTTGCCCGA GTAAAATTCT TTGTATTGGG CGTAATTATG TCGACCATAT CCACGAGCTG GGTAATGACA TTCCCGAAGA CATGGTGGTG TTTTTCAAAC CCAACTCGGC GATTAGCACA GTGCTGCATG CTGAGCATTT AGGCGAAGCG CTGCACTATG AAACTGAGCT GTGCTTTATC TATCAGCAGG GGCGTTTTAG CCATGTTGGG GTAGGGCTAG ATCTCACTAA GCGAGAGCTG CAAAGCAAAC TGAAAGCCAA GGGATTACCC TGGGAAAAAG CCAAAGCCTT CGATGGCGCG GCGCTCTTTA GTCCCTTTGT CGCTATCGAG GATGCCTGTG CGGCATTTGA ATTCAGCTTG ACGATCGATG GGGCGTTAAC CCAAGCGGGC CATATTGAGT TAATGATCTA TAACCCGCAG ACTATTCTAG AAGAATTACA ACGCTTTACT ACCTTGGAAG ACGGCGACAT TGTGATGACA GGCACCCCAA AAGGGGTCGG CATCATTCCA CCGAATCGGG TATTTAAGGT GGCCTTAGGC CTGAAGGATG CGCTACACCA AGCGCCCTTG GTCGAATGTG AATGGCAAAG CCAGTAA
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Protein sequence | MKTVNVGDKQ ICPSKILCIG RNYVDHIHEL GNDIPEDMVV FFKPNSAIST VLHAEHLGEA LHYETELCFI YQQGRFSHVG VGLDLTKREL QSKLKAKGLP WEKAKAFDGA ALFSPFVAIE DACAAFEFSL TIDGALTQAG HIELMIYNPQ TILEELQRFT TLEDGDIVMT GTPKGVGIIP PNRVFKVALG LKDALHQAPL VECEWQSQ
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