| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2684 |
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| Symbol | |
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| ID | 4253255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3202429 |
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| End bp | 3204801 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638119319 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_734812 |
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| Protein GI | 113971019 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4192] Signal transduction histidine kinase regulating phosphoglycerate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.181239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA ACTATTTTAA AATACCCACA TCTTTAGGCG GAAAATTAAT GCTCGCCTTT
GCGAGCATGA CATTTTTAAA TCTTTTTATT GGTATTACCA CAGTACTGAT TTGGGAGGAG
CTCAGTAATA AAATCAATCA TATTGTCGAG CATAGTCTCC CTCCCCTTAA TGGGGCTTAT
ATTCTTGAGC GCTCCAGTGG CAACCTGCAA AGCATTATCT CTAACAGTTA TAAAATTAAA
GACGAGCTCG GCTATCAAAA TTTTGAGAAC GATTTAAAAG ATGAAATTGA AACCATTAAG
CAAGCCTATA TCAGCAGTAA TCCCGATCAT CAATTGCTCG CAGAGCAACG GCAGGCACTC
GAACACTTTT CGAACTTAAT TGAGCAACAG GATTCATTGT TAAAGCAAAA AATTGCTTAT
AGTCAAGAGC TTGATAATCT TCAAAAACGT ATCACTTGGT TGCATCAAGA TCTCAATGAT
GAAATGACTC CTTTGATGCA GGAAGTCGAA TGGCACGTCA CCCGATTACT CTCGCACCCT
GTCGATAATC TATCGCCAAA TGCCCTGATG AATGAGTTCT TTATTCTGCA GGAATTATCG
ATCAAGGAGA CTGAGCTATT TACCCTAGTG AATGAGATTA TTGACCAGAG ATACACGCGA
GAACTAACCA GTGCCTTCTC ATATCTGGAT CAGAAAATCG CCGAAATTGA AACCTTAGTG
GAGAAACTCA CCAGCTTCCC TTCGACAATT AGCCATCGAC AAATCATGAA GAATCTCATC
ACCCTGATTA GCTCTAATGG TGAATTGATT CGACTGCTCA AACTCGATAC CCAAGCGCAG
GCTGCTTTAT CCCAGTTAGC CGACCCCTTA ACCCAAGTGT TAACCCAATT TCACCTCAAG
AACATTGCGA CACTCGAACA ATCGAGCCAA GCGTTTAATT CCCTCAATAC CAATACCAAA
TCCATGATCA TCAATGGCAA GTTGATTATT GTGCTCATTT CAATCATCTC GATTGTGATC
AGTGTATTAG TGCTGACTGT ACTTATCCGC CAAAGGGTAT TAAAGCGCTT AAACACCCTA
GAAATTGACC TGAAAAATGT GGCCGACGGC CATTTAGATT GGCCTATCAC CACCCAAGGA
AAAGATGAAA TTGGCCACAT GGGAGACTGT TTACGGCAGT TCTGTGTCGA TATGCAGGCC
ATGGTCAAAA GCAATGCGCT CACCCTAATT AATAACGCCC AAGCCAGCTT GATCACCTGT
CATCCCAATG GCGAAATCGA ATCCGCTAAC CCCCATGCAT TGCAGTTATT GAGTCTGAGC
ACACTCGCAC CGCACTTGAC CCTATGGCAG GCCTTTCCCG CCGCTTGCCA ACCGCAATTA
TTAGCGCAGT TCGCCGCCGA CAGCGAGCTA AGCCGAACAG GCCAGAGTGA ATGTATTCTC
AATTTAGTGA AACATAACGC GCCGCAATAC TTACATTTTC ACCTGCAGGC TTTCGAACAC
GCTCGCCAAG CCAAGTATAT GGTCACTATT ACCGACATCA CTAAGCAAGA ACTCAACACC
CGTGAACTCG AGCATATAGT GGCGGATAGA ACCTTAAACC TCACAGTGAA AAACCAAGAG
TTAACCGCAG AAATTGAGCA ACGCAAACTG GCGGAAGCAC ATTTGCATCA GGCACAGGCG
GACCTTATCC AAGCGGCCAA AATGGCGGCG GTCGGCCAAA CCATGACCAG CCTTGCCCAT
GAGTTAAACC AGCCACTGTC GGCCGTCAGC ACCTATTTGT ACAGTTGCCG CTTGGCGCTT
GAGACCAATC AACTCGAGTT ACTCACTGAG ATGCTCGGTA AAACCGAAAA GATGAACCTG
AGGATGGCAA AAATTATTTC GGCTATCCGT AACTTTGCGC GCAAGTCCCC CACGCAGGTG
GAGAGCGTCA GTATCGATAT CAATCAACTG GTGAATAACG CGCTGGTGCT GGTCGAAACC
CGTGCGCGAA ACGAAAACAT CATCATTCAT AATGAGTTAA CTAAAGAATA TCTTATCCAA
GTGGATGCGG TTCAAGTCGA GCAAGTGCTG CTCAACATCC TGATTAATGC CATGGACGCC
ACCGCAAGCC AGGCCGATAA ACATATCTAT GTGACTGTGC TTGAACAAAG CGCTGCCAAA
CTGACGCTGG CCATTTATGA CAATGGGCCA GGATTTGCGC CAAGTATTTT GCCGCAAATT
TTCACCCCCT TTACCACCAC CAAGGCCGTT GGTCTAGGCT TAGGATTGAG CATCTGCCGC
TCGATTCTCG AACGTTTTAA CGCTGACATT TATCTGGCAT CACACTTAGA TGGCGGCGCT
ATGATTATTT TGGAGTTCCA CAATGCCGAT TGA
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| Protein sequence | MKKNYFKIPT SLGGKLMLAF ASMTFLNLFI GITTVLIWEE LSNKINHIVE HSLPPLNGAY
ILERSSGNLQ SIISNSYKIK DELGYQNFEN DLKDEIETIK QAYISSNPDH QLLAEQRQAL
EHFSNLIEQQ DSLLKQKIAY SQELDNLQKR ITWLHQDLND EMTPLMQEVE WHVTRLLSHP
VDNLSPNALM NEFFILQELS IKETELFTLV NEIIDQRYTR ELTSAFSYLD QKIAEIETLV
EKLTSFPSTI SHRQIMKNLI TLISSNGELI RLLKLDTQAQ AALSQLADPL TQVLTQFHLK
NIATLEQSSQ AFNSLNTNTK SMIINGKLII VLISIISIVI SVLVLTVLIR QRVLKRLNTL
EIDLKNVADG HLDWPITTQG KDEIGHMGDC LRQFCVDMQA MVKSNALTLI NNAQASLITC
HPNGEIESAN PHALQLLSLS TLAPHLTLWQ AFPAACQPQL LAQFAADSEL SRTGQSECIL
NLVKHNAPQY LHFHLQAFEH ARQAKYMVTI TDITKQELNT RELEHIVADR TLNLTVKNQE
LTAEIEQRKL AEAHLHQAQA DLIQAAKMAA VGQTMTSLAH ELNQPLSAVS TYLYSCRLAL
ETNQLELLTE MLGKTEKMNL RMAKIISAIR NFARKSPTQV ESVSIDINQL VNNALVLVET
RARNENIIIH NELTKEYLIQ VDAVQVEQVL LNILINAMDA TASQADKHIY VTVLEQSAAK
LTLAIYDNGP GFAPSILPQI FTPFTTTKAV GLGLGLSICR SILERFNADI YLASHLDGGA
MIILEFHNAD
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