| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2668 |
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| Symbol | |
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| ID | 4253239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3180728 |
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| End bp | 3186673 |
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| Gene Length | 5946 bp |
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| Protein Length | 1981 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119303 |
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| Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ |
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| Protein accession | YP_734796 |
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| Protein GI | 113971003 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCTC ACCCGACTCA GCAAGACAGC ACAGCTGTGC CAAACGACCA GCGCCAAAGC
TCAAAGGCGA TGCCAAAGAT TGCCATCGTC GGCCTTGCCG TTCAGTATCC CGATGCCGAC
ACACCTGAGC AGTTTTGGCA AAATCTGCTG GATAAAAAAG ATTCCCGCAG CCAAATCGAT
GCGGCCAAAC TCAATGCCAA TCCAGCTGAT TACCAAGGTG TTCAAGGCCA AGCCGACCGT
TTTTATTGCG ACAAGGGCGG CTATATCCGC AACTTTCGTT TTGACCCGCA GGGTTATCAG
TTACCGCCGA CGGCCTTTGA TGGGCTCGAT GAAAGCTTTT TATGGGCATT AGATTGCAGT
AAAAAAGCCC TGCTGGATGC GGGTGTGGAT TTAACGGCAC CATTACTTGA GCGCACAGGG
ATTGTAATGG GCACGCTGTC GTTCCCGACC GCAAGCTCCA ATCAGCTGTT TTTACCGATT
TATCATCAAG CGGTTGAAAA GGCATTAAAA ACCAAGCTTA ATCAACCCGA ATTTGCCCTA
GCACCCTTCG CCAATGGTTC AATTGCGGGC ACGCAACAGG CCGCCAATGG TGCCATTGCC
CACACGGCGT CTAAATTGTT AAGCGATGCC CTCGGCCTTG GCGGCGCACA GCTCAGCCTC
GATGCCGCCT GTGCCAGCTC AGTGTATGCA CTTAAATTGG CCTGCGATTA TTTAACCACA
GGCAAGGCCG ATATGATGCT CGCGGGCGCG GTATCGGGCG CCGATCCCTT CTTTATCAAC
ATGGGATTCT CGATTTTCCA CGCCTATCCA GACCATGGAA TTTCGGCGCC TTTCGATAGC
AATAGCAAAG GCTTATTCGC AGGCGAAGGC GCTGGCGTAT TAGTGCTTAA GCGTTTAGAG
GATGCCGAGC GCGATGGCGA TAATATTTAT GCCATGGTCA GTGGTATTGG CTTATCGAAC
GATGGCAAAG GCCAATTTGT CTTAAGCCCC AACAGTAAGG GCCAAGTGCA AGCCTTCGAG
CGCGCCTATG CCACCGCTAA CACGCATCCG AGCAATATCG AAGTGATTGA ATGCCATGCC
ACCGGCACGC CGCTGGGGGA TAAGGTTGAG CTCACTTCGA TGGAGCGTTT TTTCGAAGAT
AAGCTCGGCG GCACTATGGC GCCGTTGATA GGTTCGGCTA AATCCAACCT TGGACATTTG
CTCACCGCTG CCGGCATGCC TGGGATCATG AAAATGATCT TTGCCATGCG TTCAGGCCAG
CTGCCCGCGA GTATCAACCT TAAAGCGCCG ATTTCATCGC CTAAGGGATT GTTTAGCGGT
AATAATATTC CCACTCAGCT ACAGGCTTGG CCCGATAAAA CAGGCAACGA TCGCCGCCAT
GCGGGGGTAT CTGTATTTGG TTTTGGCGGC TGTAATGCCC ATCTGTTGTT GGAATCCTAT
CAGCCAACAA TTCACAGCGC CGAGAAGCAA GCCAACAAAC CTGTTTATCA GCAGCAAGCA
TTAACCGTTA TCGGCATGGC GTCGCATTTT GGGCCTTTGG CCTCCATCAA TGCGCTGGAT
AAGGCGCTAA TAGCCCAAAC AGATACCTTT ATTCCGCTGC CACCTAACCG CTGGAAAGGC
TTAGATAAAC ACCCCGATAT CCTTAACCAG TTTGGCCTAA ATCGCGCGCC CAAAGGCGCC
TATATCGAGC AGTTTGACTT CGACTTTTTA CGCTTTAAAG TGCCGCCTAA TGAGGATGAC
AGGCTGATCT CCCAGCAATT GTTGCTGATC AAAGTCGCCG ACGAAGCGAT TCGCGATGCC
AAGCTAACCG CGGGCAGCAA GGTCGCGGTG TTAGTGGCGA TGGAAACCGA GCTTGAACTG
CACCAATTCC GTGGCCGGGT GAATTTGCAC ACCCAACTTG CGGATAGCTT AAAGAAACAA
GGCGTTCACC TCTCTAATGA TGAATACCTC GCCCTCGAAG CCATCGCCAT GGACAGCGTG
CTCGATGCCG CCAAGCTCAA TCAATACACC AGCTTTATTG GCAATATTAT GGCGTCGCGC
ATCGCCTCGC TGTGGGACTT TAACGGCCCG GCGTTTACCA TTTCAGCCGC CGAGCAATCG
GTCGCTCGCT GTATCGATGT GGCGCAAAAT TTACTGTCCC AAGAGGCCCT CGATGGCGTA
GTGATTGCCG CCGTGGATTT AAGCGGCAGT GTTGAACAGG TTATATTGAA AAACGCTCAA
ATCGCCGTTG ATCTCGATGC CAACAGCGCG AATCCACAGT GGAAGGTGGG TGAAGGCGCG
GGCGCTATCG TGCTGACAAA CCAGCAAGCG AGCAACAGTC AACAAACGAG TAACAGTTCT
CAAAAGGGCT ACGGCCAAAT TCGTGCTCAG GCATTTGGCA CACATCATCA GCTGCCCAAG
CTGCTTGATT CGCTGATAAC CGAAACGGCT ATCGCCAATC CTTCAGTGCC CGCTGCCATC
CATATGGTTG AGCAATGTAT TGCCCCAGAA GAGCAACTGC CAGCGGAGCA GCTATTAGCG
CAGCTTAATC TTATGGGGAC GCCATGCAAT CGAGTCGCCA ATACCCTTGG GCATAACTTT
GCCGCTGCGG GTATGGCCAG TCTTTTGAAT ACCCTGTTAA GCCTAAAGAA CGGGTCTGCG
GCTTCAAATA AAAACACCGA TAAGCATGCA TTAGTGTCTA CCCAAAGCCA AGGGGTGAGT
TCGCTGCTGC TGTTAAGCCA AACGGCAACG CAGTCGGCGC AACTAGAACA GCGCCTTGAG
CAAGATTTAA CCTTAAGTGA GCAAAAACAT TTAATCAAAC CAGTGACGCT CGGTGGCCGC
GATATCTATC AACATATTGT GGATACGCCA CTGCCCGCAC TTGCCGCCAT CCAAGGCAAG
ATGCGCCAGT TGCAGCCTGT CGCACCGCAG GCGACACAAA CTGTGCCCAG AGTACAAGCT
GCACTTGATT TCACGGCTGA AAACGCCACC CCATTTGCCA CACCAATAGC AGTAGAGAGC
GGTATGTCAT CTAACGCACC ACACCAATAT TCGGCGGCGC CCTTGGCGCA GGATAGGGCA
TCGCAGGATA GTGCGGCACT ATTACAAAAC CAGCAACTGT TACAAAACCA GCAATTGGCC
CGCGAGGCGC ACTTAGCCTT TTTACAGAGC CGTGAGCAAG GGCTCAAACT GGCCGATGCC
CTGTTAAAAG CGCAATTGTC CCAGACGACA CAAATGGGGT CTGTTGCACC TCATGTTGCC
ACCAGCGCCA ATGTTGCTCC CATCGCAGCG CAGCAAGCGG TATCAGTCCC AGAACTAAAA
CCAGATCACG CAAATGTCGC TCCCTATACG CCACCCATTC CTGCGGCTAA GCCCTGCATT
TGGAACTATC AGGATCTGGT GGAATACGCC GAGGGCGACA TTGCCAAGGT CTTTGGCGCC
GATTACGCCA TTATCGACAG CTACGCACGT CGGGTGCGTC TGCCAACCTC GGATTATCTG
CTAGTCTCGC GGGTGACTAA GCTCAACGCG CAAATGAACC GCTATCAGCC GAGCACTATG
ACCACAGAGT ACGACATTCC CGTGGATGCG CCCTTCTTGG TCGATGGCCA AATTCCGTGG
GCGGTGGCAG TCGAATCGGG CCAGTGCGAC TTAATGCTCA TCAGCTACTT AGGTATCGAT
TTTGAAAACA AAGGCGAGCG CGTCTATCGC CTGCTCGACT GCACCCTTAC CTTCCTTGGG
GATCTGCCCC GCGGCGGTGA CACCCTGCGC TACGATATCT CCATCAACCA CTTTGCCCGT
AATGGCGATA CCCTGCTGTT TTTCTTCTCC TACGAATGCT TCGTGGGCGA TAAGCTGATC
CTCAAGATGG ATGGCGGCTG CGCGGGATTC TTTACCGATA AAGAACTGGC CGATGGCAAA
GGGGTGATCC GCACCGAGGC CGAAATTAAG CTGCGCGAGC AAGCACAAAT TGCACTGGCC
AATGAATATG CCCGAAACGG CAATAAACCA CGCTTCACGC CGCTACTTAA CTGCGCGCAA
ACGGCCTTCA GCTACGGCCA AATCCATCGT CTACTGAGCG CCGACATTGG CGGCTGTTTC
GGCGGTGAAC ATGCGGCCCA TCAGGCAAAG TTTGGCCTCC AGCCTTCACT GTGCTTCGCC
TCGGAAAAAT TCCTGATGAT CGAGCAAGTT AGCAAGCTCG AAGTACATGG CGGCGCTTGG
GGCTTAGGCT TGATTGAAGG TCACAAGCAA TTAGCCCCCG ACCATTGGTA TTTCCCCTGC
CATTTCAAGG GCGACCAAGT GATGGCCGGC TCCCTCATGG CCGAAGGTTG TGGTCAGTTA
TTGCAATTCT TTATGCTGCA TATTGGTATG CACCTTGGGG TGACTAACGG TCGTTTCCAA
CCCCTTGAAA ACGCATCGCA AAAAGTGCGC TGCCGCGGTC AAGTATTGCC ACAATCTGGC
ACGCTCACCT ATCGGATGGA AGTCATCGAA ATTGGCATGA GCCCTCGCCC CTATGCCAAG
GCGAATATCG ATATTCTGCT CAATGGCAAA GTAGTGGTGG ATTTCCAAAA CCTCGGGGTG
ATGATTAAAG AAGAAGCCGA TTGCACCCGC TATTCGCAAA GCGATTATTC GCAAGGCAGC
TCTTCGCAAA GCAGTTCTTC ACAGAGTAAT GGTGCCCAAG CAGCAAATAT CGCAATCCTC
GCGGAACAAG CGCCACTGAT GGCGCAAATT CCAGATGTTT CAGCTCCCCT GAATAAAGGC
GTTGTACCAC TTAAACATGT GAGCGCGCCG ATTGCGCCAG CAGGCTCTAA GTACGCCAAC
CGCGTGCCCG ACACCCTGCC GTTTACGCCT TACCATTTGT TTGAGTTTGC CACCGGCGAT
ATTGAAAACT GCTTCGGCTC CGATTTTAGT ATTTACCGAG GCTTAATCCC GCCGCGTACG
CCCTGCGGCG ATCTGCAACT CACCACCCGA GTGGTGGCCA TTGAGGGCAA ACGTGGCGAA
CTGAAAAAGC CATCCTCCTG CATTGCCGAA TATGAAGTGC CCAGCAACGC GTGGTATTAC
GCTAAAAACA GCCACCCGAG CGTGATGCCC TACTCTGTGT TGATGGAAAT CTCCCTGCAG
CCCAATGGCT TTATCTCGGG TTATATGGGC ACGACTTTAG GCTTCCCGGG GCAGGAGTTA
TTCTTCCGCA ACCTCGACGG CAATGGCAAA TTACTGCGCG AAGTGGATTT ACGCGGTAAG
ACCATAGTCA ACGATTCGCG CCTGCTGTCC ACCGTGATTG CAGGCAGCAA TATCATTCAA
AACTTTAGTT TCGAACTGAG CTGCGATGGC GAGCCCTTCT ACCGTGGTAA TGCGGTTTTC
GGTTACTTTA AGGCCGATGC GCTTAAAAAC CAGTTGGGGA TCGACAACGG TAAAATTACC
CAAGCTTGGC ATATTGAGCG CGATATCAAA GCCGACAGCC AAATCAATCT GTTAGATAAA
AATGGCCGCA GTTTTGTGGC GCAGCAGGGC AAGCCACACT ACCGCCTTGC GGGTGGTCAG
CTGAACTTTA TCGACAAGGC CGAGATAGTA AAAACTGGCG GTAAGAAGGG ACTGGGATAC
TTGTACGCCG AGCGCACCAT TGACCCGAGC GATTGGTTCT TCCAGTTCCA TTTCCATCAG
GATCCTGTAA TGCCAGGCTC CCTCGGCGTC GAGGCGATTA TCGAATTACT GCAAACCTAT
GCCATAGACC AAGACCTAGG TGCAGGCTTC AATAATCCGA AATTTGGCCA AATTCTGTCA
GAAATCAAAT GGAAGTATCG CGGTCAAATT AATCCATTAA ACAAACAGAT GTCGCTGGAT
GTGCATATCA CCAGCATTGA AGATAAAGAC GGAAAACGCA TCATCAAGGG CGATGCCAAC
CTGAGTAAGG ATGGCCTGCG CATTTATGAG GTAACCGATA TCGCAATCTG CATCGAAGAA
GCATAG
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| Protein sequence | MHAHPTQQDS TAVPNDQRQS SKAMPKIAIV GLAVQYPDAD TPEQFWQNLL DKKDSRSQID
AAKLNANPAD YQGVQGQADR FYCDKGGYIR NFRFDPQGYQ LPPTAFDGLD ESFLWALDCS
KKALLDAGVD LTAPLLERTG IVMGTLSFPT ASSNQLFLPI YHQAVEKALK TKLNQPEFAL
APFANGSIAG TQQAANGAIA HTASKLLSDA LGLGGAQLSL DAACASSVYA LKLACDYLTT
GKADMMLAGA VSGADPFFIN MGFSIFHAYP DHGISAPFDS NSKGLFAGEG AGVLVLKRLE
DAERDGDNIY AMVSGIGLSN DGKGQFVLSP NSKGQVQAFE RAYATANTHP SNIEVIECHA
TGTPLGDKVE LTSMERFFED KLGGTMAPLI GSAKSNLGHL LTAAGMPGIM KMIFAMRSGQ
LPASINLKAP ISSPKGLFSG NNIPTQLQAW PDKTGNDRRH AGVSVFGFGG CNAHLLLESY
QPTIHSAEKQ ANKPVYQQQA LTVIGMASHF GPLASINALD KALIAQTDTF IPLPPNRWKG
LDKHPDILNQ FGLNRAPKGA YIEQFDFDFL RFKVPPNEDD RLISQQLLLI KVADEAIRDA
KLTAGSKVAV LVAMETELEL HQFRGRVNLH TQLADSLKKQ GVHLSNDEYL ALEAIAMDSV
LDAAKLNQYT SFIGNIMASR IASLWDFNGP AFTISAAEQS VARCIDVAQN LLSQEALDGV
VIAAVDLSGS VEQVILKNAQ IAVDLDANSA NPQWKVGEGA GAIVLTNQQA SNSQQTSNSS
QKGYGQIRAQ AFGTHHQLPK LLDSLITETA IANPSVPAAI HMVEQCIAPE EQLPAEQLLA
QLNLMGTPCN RVANTLGHNF AAAGMASLLN TLLSLKNGSA ASNKNTDKHA LVSTQSQGVS
SLLLLSQTAT QSAQLEQRLE QDLTLSEQKH LIKPVTLGGR DIYQHIVDTP LPALAAIQGK
MRQLQPVAPQ ATQTVPRVQA ALDFTAENAT PFATPIAVES GMSSNAPHQY SAAPLAQDRA
SQDSAALLQN QQLLQNQQLA REAHLAFLQS REQGLKLADA LLKAQLSQTT QMGSVAPHVA
TSANVAPIAA QQAVSVPELK PDHANVAPYT PPIPAAKPCI WNYQDLVEYA EGDIAKVFGA
DYAIIDSYAR RVRLPTSDYL LVSRVTKLNA QMNRYQPSTM TTEYDIPVDA PFLVDGQIPW
AVAVESGQCD LMLISYLGID FENKGERVYR LLDCTLTFLG DLPRGGDTLR YDISINHFAR
NGDTLLFFFS YECFVGDKLI LKMDGGCAGF FTDKELADGK GVIRTEAEIK LREQAQIALA
NEYARNGNKP RFTPLLNCAQ TAFSYGQIHR LLSADIGGCF GGEHAAHQAK FGLQPSLCFA
SEKFLMIEQV SKLEVHGGAW GLGLIEGHKQ LAPDHWYFPC HFKGDQVMAG SLMAEGCGQL
LQFFMLHIGM HLGVTNGRFQ PLENASQKVR CRGQVLPQSG TLTYRMEVIE IGMSPRPYAK
ANIDILLNGK VVVDFQNLGV MIKEEADCTR YSQSDYSQGS SSQSSSSQSN GAQAANIAIL
AEQAPLMAQI PDVSAPLNKG VVPLKHVSAP IAPAGSKYAN RVPDTLPFTP YHLFEFATGD
IENCFGSDFS IYRGLIPPRT PCGDLQLTTR VVAIEGKRGE LKKPSSCIAE YEVPSNAWYY
AKNSHPSVMP YSVLMEISLQ PNGFISGYMG TTLGFPGQEL FFRNLDGNGK LLREVDLRGK
TIVNDSRLLS TVIAGSNIIQ NFSFELSCDG EPFYRGNAVF GYFKADALKN QLGIDNGKIT
QAWHIERDIK ADSQINLLDK NGRSFVAQQG KPHYRLAGGQ LNFIDKAEIV KTGGKKGLGY
LYAERTIDPS DWFFQFHFHQ DPVMPGSLGV EAIIELLQTY AIDQDLGAGF NNPKFGQILS
EIKWKYRGQI NPLNKQMSLD VHITSIEDKD GKRIIKGDAN LSKDGLRIYE VTDIAICIEE
A
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