| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2662 |
|---|
| Symbol | |
|---|
| ID | 4253233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3166519 |
|---|
| End bp | 3167259 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638119297 |
|---|
| Product | SpoOM family protein |
|---|
| Protein accession | YP_734790 |
|---|
| Protein GI | 113970997 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4326] Sporulation control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA AATTGCTGGC CTCTGTCGGT ATCGGTGGTG CGACGGTCGA TACCCAATTA
ATTGATAATC GACTGCTGCC AGGTCAAATC TTTAGTGCCA CTATCATCGT TAAAGGCGGT
AATGTGCCGC AGCAGATCTC CGGCCTCGAC TTAGCCCTAA TGACTAAGGT GAAAGTGAGT
AGCGATAACG GCGACTATTT TAAGAACCAT CGCTTGGCGA GCTGGCGCTT AACTGAGTCC
TTTGAAATTC AAGCGGGTGA AATTCGCGAG ATCCCGTTTT CAGGTAAATT GCACCCCGAA
ACCCCTTTTA CTCAGCTCCC AGTGCGCAAT AATCAATCCC AGGTATGGTT ACAAACGGGA
GTGGACATAG ATACCGCGCT CGACCCTAGC GATATCGATG CGCTGGTTAT TATGCCAACG
GCGATTGCCG AGCATGTGTT AAAGGCGATG GACGGCCTTG GTTTTGTGTT AGTTAAAGCC
GATGTGGAGC AAGGTTTCCT CAATACACGC GCCTTTCGTT CCACATCGGG TTGTTACCAA
GAGCTAGAGT TTAAGCCGCG CAATATGGGC TTTAATCGTT TGCGTGAGAT TGAGGTTTCT
CTGGTGTGCG ATGCCGAGCA AACCCATGTG TTGCTTGAGC TTGACCGCGC ATTCCGTGGC
GATGGTTACT TGTATTTCAG CCTGCCAAAC AATGCCACGT TGAGCCAAGT GCAAGAGATT
TTTAGGGCGA ATTTGGGCTA A
|
|---|
| Protein sequence | MFKKLLASVG IGGATVDTQL IDNRLLPGQI FSATIIVKGG NVPQQISGLD LALMTKVKVS
SDNGDYFKNH RLASWRLTES FEIQAGEIRE IPFSGKLHPE TPFTQLPVRN NQSQVWLQTG
VDIDTALDPS DIDALVIMPT AIAEHVLKAM DGLGFVLVKA DVEQGFLNTR AFRSTSGCYQ
ELEFKPRNMG FNRLREIEVS LVCDAEQTHV LLELDRAFRG DGYLYFSLPN NATLSQVQEI
FRANLG
|
|---|
| |