Gene Shewmr4_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2647 
SymbolpurU 
ID4253218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3153965 
End bp3154867 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content47% 
IMG OID638119282 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_734775 
Protein GI113970982 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGACC ATAAAGGAGA TCAGATTTTG CAGTCACAGC ATGAAGTAGT ATCGAACGCA 
CAACCCGCCT TAGCACGTAA AATCCTGATG ACAGATTGCG CCGATGCCCA AGGGCTTATC
GCCAAAATCA CCAGTGTTTG TTTTAATCAT CAGCTTAATA TCATCAAAAA CAGTGAATTT
GTGGATAATG CTCAGGGGCG ATTTTTTATG CGTACAGAGC TTGAGGGGCA CTTTAACAGC
GAGCAATTAC TGCAGGATCT GCGTGAGGTG TTACCCGCCC AAAATCATAT GACCTTGGTC
AGCGCGGGCA AGAAGCGCAT CGTCGTATTA GTCACCAAAG AGGCCCATTG TTTGGGCGAT
CTGCTGATGA AGGCCTACTA TGGCGGCTTG AATGTTGAGA TTGCAGCCGT AGTGGGTAAC
CATGATGTGT TAAGGGAATT GGTTGAAAAA TTTGATATTC CTTTTCACCT TGTCAGTCAT
GAAGGGCTCG ACAGAATTCA ACATGAGCAG GCGTTATTGA CCGCCGTGTC GCAATATGCG
CCCGATTATC TGGTGCTCGC CAAATATATG CGGGTGCTGA CACCTGATTT TGTCGCCGAA
TATCCAAACC GTATCATCAA TATTCATCAC TCTTTCTTGC CTGCCTTTAT TGGGGCTGCA
CCTTACCGCC AAGCCTGGGA GCGAGGGGTA AAGATCATCG GCGCGACTGC GCATTTTGTG
AATAATTGCC TCGATGAAGG GCCAATCATT AAGCAGGACG TGATCCCCGT CGATCATAGT
TACAGTGCGC TTGAAATGGC CAAAGCGGGG CGCGATGTCG AAAAAAGTGT CCTCAGCAAA
GCGTTACAGC TCGTGCTGAA TGAGCAAGTG GTGGTTTACG GTAATAAAAC CATTGTTTTT
TAA
 
Protein sequence
MRDHKGDQIL QSQHEVVSNA QPALARKILM TDCADAQGLI AKITSVCFNH QLNIIKNSEF 
VDNAQGRFFM RTELEGHFNS EQLLQDLREV LPAQNHMTLV SAGKKRIVVL VTKEAHCLGD
LLMKAYYGGL NVEIAAVVGN HDVLRELVEK FDIPFHLVSH EGLDRIQHEQ ALLTAVSQYA
PDYLVLAKYM RVLTPDFVAE YPNRIINIHH SFLPAFIGAA PYRQAWERGV KIIGATAHFV
NNCLDEGPII KQDVIPVDHS YSALEMAKAG RDVEKSVLSK ALQLVLNEQV VVYGNKTIVF