| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2634 |
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| Symbol | |
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| ID | 4253205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3139007 |
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| End bp | 3140377 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119269 |
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| Product | peptidase RseP |
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| Protein accession | YP_734762 |
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| Protein GI | 113970969 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000113842 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0898661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATT TTTTGTGGAA CTTAGGTTCG TTTATCGTCG CGCTTGGGCT GCTTATCACC
GCCCACGAAT ACGGCCATTT CTATGTTGCA CGCCGCTGTG GCGTGAAAGT TGAACGTTTC
TCAATTGGTT TTGGTAAGGC GATTTGGCGC AGAGTCGGCC AGGATGGCAC TGAGTATGTG
GTCGCCATGA TCCCGTTAGG CGGCTATGTC AAAATGCTCG ATGAGCGAGT AGAAGACGTA
CCCGATGAGT TAAAGGATCA AGCCTTTAAC CGTAAAAGTG TATGGCAACG GATTGCGATT
GTGGCCGCAG GTCCGATTGC AAACTTTATC TTTGCAATTA TCGCACTGTA TTTAATGTAT
TTAATTGGCG TGCCATCGCT CAAGCCAGTG ATTACCTCAA CCACACCTGG CACAGCGGCG
GCGCAAATCC AAGTGACTGA GCCGATGCAA GTGACGGCGA TTTCAGGTCA ACCAGTACGT
AATTGGGAAG AAGTGAATTT AGCGCTAGTT GGCCATATCG GCGATGACAG TTTAACCGTC
TCACTTGCGC CGTTAAATGG CTTGCAGGGC TTAGACACCT CGGCCCGTAC TTATACCCTT
GATACCCGCG AGTGGCGCTT CGACCCAGAA AAAGAGTCGC CGATTACTGC GCTTGGGTTA
GGCGTGTATC GCCCCGCAAT TGAGCCACAA ATTGCGCTCA TCAGTGAAGG CAGTGCTGCG
GCTAAGAGTG AGCTTAAAAT CGGTGATACT TTGGTTGCTA TCAATGGCGA AAATTACACC
GATTGGCAAG CTTTTGTTGA CATTATTCAA CATTCTGCCA ATGTGCCAGT GGAGTTAACT
GTGCGCAGAG CTGGCGAGCA GTTTGCCATC TCAGTCACAC CCTCTGGTGT TAAAAATAGC
GATGGCAAAG AAGTGGGCGT GCTTGGGGTG AGCCCGACTC AGGCGCAATG GCCTGAGAAT
ATGCGCCTAC AACTCGAATA TGGTCCAATC GATTCTTTCG CTATCGCGGT TGATAAAACA
TGGCAACTTG TGGCCGTGAG CTTTAAGATG ATTGGCAAAT TATTTACTGG CGATGTGTCA
GTGAAAAACT TAAGTGGACC TATCTCAATC GCACAGGGTG CGGGCAATAG TGCAAACTAT
GGCTTGGTTT ACTTTCTCGG TTTCCTCGCG CTTATCAGTG TCAATTTAGG CATCATTAAC
CTGCTGCCAT TGCCTGTGCT CGATGGAGGA CACCTGCTGT ATTACTTCGT TGAGGTAATC
ACTGGTAAAC CTGTGTCTGA AAAGGTACAG GAAATAGGAT TCAGATTTGG GGCAGCATTG
CTGCTGATGT TGATGAGCAT CGCGCTCTTC AATGACTTTG CCCGACTCTG A
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| Protein sequence | MLDFLWNLGS FIVALGLLIT AHEYGHFYVA RRCGVKVERF SIGFGKAIWR RVGQDGTEYV
VAMIPLGGYV KMLDERVEDV PDELKDQAFN RKSVWQRIAI VAAGPIANFI FAIIALYLMY
LIGVPSLKPV ITSTTPGTAA AQIQVTEPMQ VTAISGQPVR NWEEVNLALV GHIGDDSLTV
SLAPLNGLQG LDTSARTYTL DTREWRFDPE KESPITALGL GVYRPAIEPQ IALISEGSAA
AKSELKIGDT LVAINGENYT DWQAFVDIIQ HSANVPVELT VRRAGEQFAI SVTPSGVKNS
DGKEVGVLGV SPTQAQWPEN MRLQLEYGPI DSFAIAVDKT WQLVAVSFKM IGKLFTGDVS
VKNLSGPISI AQGAGNSANY GLVYFLGFLA LISVNLGIIN LLPLPVLDGG HLLYYFVEVI
TGKPVSEKVQ EIGFRFGAAL LLMLMSIALF NDFARL
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