Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2630 |
Symbol | fabZ |
ID | 4253201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3134406 |
End bp | 3134870 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119265 |
Product | (3R)-hydroxymyristoyl-ACP dehydratase |
Protein accession | YP_734758 |
Protein GI | 113970965 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000191637 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0828636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAAATC AAATGAACAC TATGGATATT ACGGAGATCC TTAAGTATCT GCCCCATAGA TATCCATTTT TATTAATCGA TCGCGTTTTG GATTACACCC CAGGTGAGAG TCTCCATGCG ATTAAAAACG TGACGATTAA TGAACCCTTT TTCCAGGGAC ATTTCCCTGT TCAGCCTGTG ATGCCTGGCG TGCTGATTTT AGAAGCTATG GCACAGGCCA CTGGTCTGCT CGCATTTAAG ACCATGAGTG ACGATGTACC ACCTCCTGGT GTGTTGTACT ATTTTGCCGG TATCGATAAC GCGCGTTTTA GACGTGTGGT TGAGCCTGGC GATCAAATCC ATTTTGACGT CAAAATGATT AAAGAGCGCC GCGGAATTGG CGTTTTCTAT GGTGAGGCCA AAGTGGATGG TGAAGTGGTT TGTTCCGCTG AAATCATGTG TGCCCGCAGA GAGATTAATC AGTGA
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Protein sequence | MSNQMNTMDI TEILKYLPHR YPFLLIDRVL DYTPGESLHA IKNVTINEPF FQGHFPVQPV MPGVLILEAM AQATGLLAFK TMSDDVPPPG VLYYFAGIDN ARFRRVVEPG DQIHFDVKMI KERRGIGVFY GEAKVDGEVV CSAEIMCARR EINQ
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