Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2625 |
Symbol | |
ID | 4253196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3126665 |
End bp | 3128062 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119260 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_734753 |
Protein GI | 113970960 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0104928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCGG TGGATCTTTG TGCCCATATA GCGCGATTTT TAGCGAGCTT ACCTCTGCAA ACGGGGAGCA AGTTAGTCCT CGCTTACAGT GGCGGCGTCG ATTCCGAAGT GCTCGCCTAC GGTTTGAGTG AATTCGCCAA ACATCACCCC GAGTTACATT ATCAATTGAT TTATGTGCAC CATGGCTTGA GCCCTAATGC CGATGCTTGG GCCAAGCACT GCCAAACTCG CGCCGCCAGT TACGGTTTGC CTATCACAGT CGAGCGGGTG CAACTGACCC TAGGGCCGAG AGTGAGTGTT GAAGCCGAGG CGCGAAGAAT GCGTTATCAG GCGATATTAC AGCACCTTAA GCCTCAGGAT GTGCTGCTGA CCGCCCACCA TGAAGACGAT CAACTCGAGA CGATTCTCCT CGCCCTCAAA CGCGGTCAGG GCCCCAAAGG ATTAGCCGCC ATGGGGCAAA TCCAAATGCT CTCTCTCGGC GAGAAGGGGA CTTGCTTGCA GGCTCGGCCC TTGCTCGATA TTAGCCGTGA GCAGATTGAA GTTTTCGCTC AAACGCGGCA GTTAGTGCAT ATCGAAGATG AAAGTAATCA AGACGATAAA TACGATCGTA ACTTTTTACG CCTCGAGATT ATCCCACGCC TAAAAGCGCG TTGGCCCAGT ATTGCCACTA CCGCAAGCCG CAGCGCCCAG CTCTGCGCCG AGCAGCAGGC CATAGTGGAT GCCGAGGTGA GTGAGCGTTT ACCTAAGCTG TTAACCGAGG CGTCCTTTAC CCAGCAAACC GTGCTTAAGC TTGATGCGCT CTCTACGCAA ACCAGCGAAT GGCAAGGATT ACTGCTGCGG GGTTTTATCG AATCCCAAGG CTTTGCATTG CCTTCCTATG TGCAGCTGCA GCAAATTCTG CAGCAGTTAA TGGGAGCAAA AGAGGATGCC AAAGTGCAGA TCCAAATTGG TGACTGTGTG CTGCGCCGCT TCGCTGGGAT GCTTTATCTG GATACGGTAA GCACTGTATC CGCCGCGCCG CGAATCACAG CGCGTAAACT GCATCATGAT ATTCAGGCTT TACTGACTCA AGCATCAACA ATGGTTGAAG ACAAGATTGC GCCATTTACC TTGGCTACAA CTGGCCCTCG GCTGCGTTTA CCCAATGCGG ATGAGGTGGT GAGCCTGCGT TATCAGTTGC CGGGGCAATT TCGCTGTCAG CCGCATTTTC GTGATAAGGG CCGTGAGCTT AAAAAACTCT GGCAAGAATG CGCTGTGCCG CCATGGTTAC GTGCCGATGT GGGGTTCTTG TTCTATAACG AGCGTTTAGT GATGGTGCTG GGGCTTTGGG TCGAAAAGCC ATTTTGTGCC CAAGGGGATG ATGTCGGGCT TAAGTTTGAT GGGCATGCAA TCGGATAG
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Protein sequence | MVAVDLCAHI ARFLASLPLQ TGSKLVLAYS GGVDSEVLAY GLSEFAKHHP ELHYQLIYVH HGLSPNADAW AKHCQTRAAS YGLPITVERV QLTLGPRVSV EAEARRMRYQ AILQHLKPQD VLLTAHHEDD QLETILLALK RGQGPKGLAA MGQIQMLSLG EKGTCLQARP LLDISREQIE VFAQTRQLVH IEDESNQDDK YDRNFLRLEI IPRLKARWPS IATTASRSAQ LCAEQQAIVD AEVSERLPKL LTEASFTQQT VLKLDALSTQ TSEWQGLLLR GFIESQGFAL PSYVQLQQIL QQLMGAKEDA KVQIQIGDCV LRRFAGMLYL DTVSTVSAAP RITARKLHHD IQALLTQAST MVEDKIAPFT LATTGPRLRL PNADEVVSLR YQLPGQFRCQ PHFRDKGREL KKLWQECAVP PWLRADVGFL FYNERLVMVL GLWVEKPFCA QGDDVGLKFD GHAIG
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