| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2622 |
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| Symbol | |
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| ID | 4253193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3123011 |
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| End bp | 3123220 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638119257 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_734750 |
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| Protein GI | 113970957 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00345453 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTAAAA CTACTGGTAT AGTAAAATGG TTTAACGAAG ACAAAGGTTT TGGTTTTATT
TCCCCTGATA ACGGTGGCGC TGACGCATTC GTTCACTTCC GCGCAATCGT ATCTGAAGGC
TTTAAAACTT TAGCCGAAGG CCAAAAGGTT TCTTACGAAG TCGAACAAGG TCAAAAAGGT
CCTCAAGCTG CGAACGTTGT TGTTCTGTAA
|
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| Protein sequence | MSKTTGIVKW FNEDKGFGFI SPDNGGADAF VHFRAIVSEG FKTLAEGQKV SYEVEQGQKG
PQAANVVVL
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