| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2620 |
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| Symbol | |
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| ID | 4253191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3117228 |
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| End bp | 3120476 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119255 |
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| Product | SNF2-related protein |
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| Protein accession | YP_734748 |
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| Protein GI | 113970955 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00228348 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCGCT TGTCCCCCCA AGAGCCAATC CAATTGACTC AAACGGCTAT TGAGTCCTTA
TTCACGCCGC CGACACTGAT GCGCGCCCGT GATTATGTGA TGCAGGGGAG GGTGTTAAGC
GCGAAAGCCA ATGCCGATTT TCGCCATATC GAAGGCACAG TCACGGGCAC GGAAACCACG
CCCTATCGTC AGGATATTCG TCTGGTCAGT GTCAATCATA AGCTAGTGAT GAATGGCTTT
TGTTCCTGCC CCGCCAGCGG CAATTGCAAG CATATGGCCG CGGTGCTCTA CAGTCTGCTT
ACGGATAAGA CCGTTGAGGA CCAACGTATC GCCCAGTGGT TACACCTACT CGATGAAGCC
GATGATCCCA ATGTGAATGA TGTCGAATCC CTCTACGATG ACAGGGTGCT GTATATCCTT
TCAAAGGACG ATAACGGGGT GTTTATCGAG CTTAGGCGCG GCAAGCTTGG CAAGAAGGGT
GGTTACAACA AGGGCACTAA GATTGCGCTC TCGGACGTGC AATATTATAT GCCCGCTTGG
ATTGGCGCCG AGGATGTGCT GATCTTAAAT CTTATCATGT CGACCAGACG CCACGGCGCT
TCGCGCCTGT ATCTTAAGGC GCAGTTAGGG GCGGTAGCGA TTGAGAAAAT GCTCGCCACC
GAGCGCTGCT TCTGGGAGGA GAGCCGCCTC GCATTAACCG CGGGCGAGGC CATTACACCG
CAATTTCTCT GGCAAGATAT CGACAGCGAG CACAAGCAAA TGCGCCTAGT CTTGCCCGAG
CGGGATAACT GGGAACTCGT GCCGACAGAG CCGCCTTACT ATATCGAACT GGATTATTTT
CACATAGGCC TTATCGATAC CGACATTAGC GTCGATAAGC TGCGGCTACT TAGCCAAATG
CCGCCCGTGC CGAGCACCCA GGTTGAACTG GTGAGCCATC GACTGATCAA GCATTTTTCG
GCGCGCACTG TGCCGCCGCC AAGTGCGATT GATTTTGTTG AGCTAAGAGA TAAGTTACAG
CTTCGTTTGA CGCTTAAGGT TGTCCCCGCA GGCACAATGC CACCTGGCAG CGCTCTGTCA
TCTGCAACGG AGACCCGCAT CGCCCAGCCG TATCTGGCGC TGGAGTTTGT CTACGGAGAT
CTCGTCTTAA GTGGCAATGC CGCCAAAGAA GCATTAACCC TAGTGACTCA AGGCGGCACC
ACCTATCAGA TAAACCGCGC GCTTGAAGAA GAGCTGCAAG CCGTATCAAA GCTGCAAACC
CTTGGCTTTA GCCGCTTTTC CTTGGAGGGC GCTGCAAATG GGGCTTCCCT TTGGAGCTTA
GGTCACTTGC CCGATGCGAT TCGGGAATGG CTAGCGTTTA TCGATGAAGA AGTCCCAAGA
TTACAAACTC AAGGCATAGA GGTGCGATTG GCCCCAGAGT TTAGCCTTAA GGTGGTCGAT
ACGCCGTTAA CGGTTGAGCT GGATGACAGC CAAGAGGGCT GGTTCTCCCT GTCGTTGCAT
GCCGATATCA ATGGTCAACG CTTGCCTATG TTGCCGCTGG TGGCAACTTG GTTAAAACAA
CATGGCGAGC CCGCCGATGA TGCTGAGTTA TTGCTACCCA GCCCCTCTGG CGAATGGCTT
AAAATTAAAG CCAGTGTTAT CAAACCTTTA ATGAGCATTA TTCAAGAGTT GTTTGAGCAG
CATCGCGGCC ACAGTATCGC CATACCTAAG TACCGTGCGC ATTTACTCAA TGAGTTAGCC
GAAAGCGAGA TTAGCCTGCT CAATGGTGAA AGGGTGCGTC AGCTCGCAAC AAAGTTAGCC
GAATTTAATG GTGTGGTTGC GGTCAGTGCG CCGACAGGAC TGAATGCACA GCTGCGGGCT
TATCAGCAGC AAGGCCTAAA TTGGCTTTGT TTTTTAAAGG AATATCAACT CGGCGGCATC
TTAGCCGACG ACATGGGGCT TGGAAAAACC ATTCAAACCT TGGCGTTTCT GTTAAAGCAG
CAGGAGGCTA AATCAGCAGG GCAGCCAAGA TTGCCGAGCC TGATTATTTG CCCAACCAGT
TTAGTGGGGA ACTGGGCGAA GGAGGCGGCC AAGTTTGCGC CGTCGTTAAG TTTGGCGGTG
ATCCATGGCG CCCAGCGTGG GCCGCTGTTA TCGCGATTAA GCGAGTTTGA TGTCGTCGTC
ACAACTTATC CCCTTATGGT GCGGGATTAC GATTATTACC AGACTCAGCC GTTTGAGCAT
ATAGTGCTCG ATGAGGCGCA GCAGATTAAA AACGCCCAAG CCAAAGTGAG CCAGCAAATT
AAGGCGTTGC AAGCGCCGTT TAGACTCTGC CTTACCGGCA CGCCCCTTGA GAATCATTTA
GGTGAACTCA AGTCATTGAT GGATTTTTGT TTACCGGGAC TCTTGGGAAC AACCGCCTAT
TTTAATAAGG CGTTTCGCTA TCGGATTGAG CGTTATGGCG ATGGCGAGCA GGCGAAGGTG
TTGAGTCAAC GCATCGCCCC CTTTGTGTTA AGGCGCACCA AGGCCGAGGT AGTGACTGAG
CTGCCACCTA AAACCGAGAT CTACCAAACC CTAGAGCTTG AGAAAGATCA GCGTAATCTA
TACGAAAGTA TTCGCCTGAG TATGGAGAAA AAAATTCGAG AATTATTTGC AAGCCAAGGC
GTGGCGGGCA GTCATATCGA GTTTTTAGAT GCCTTGCTCA AATTGCGCCA AGCCTGCTGC
GATCCGCGAT TAGTCAAACT CGAGCAGGCA CAAAAGGTTA AAAATAATGC CAAGTTAAAC
TGGCTGAGCC AAAACCTGCC GGAAATGGTG CAGGAAGGTC GCAAGATTTT AATCTTCAGC
CAATTTACCA GTATGTTGAT ATTAATTGAG GAATTGCTGC AATCCCTCGA CATCGACTAC
AGCAAACTGA CGGGGCAAAC TCGGCTGCGT CAGGGGCAAA TTGATAAGTT CCAAGAAGGC
GATACGCCGG TATTTTTAAT CAGCTTAAAG GCGGGGGGCA CAGGGCTTAA TCTCACTGCG
GCGGATACGG TTATCCACTA CGATCCTTGG TGGAATCCGG CGGCAGAAAA GCAAGCGACG
GATAGGGCGC ACCGCATTGG CCAAGAAAAT CCAGTGTTCG TTTACAAGCT GATTGCCGAA
GGCACGGTCG AAGAGAAAAT CCAAGAAATG CAGCAGCATA AGCAAGGTTT AGCGGATAGT
ATTCTCGAAG GAAAAGGCAA AGGCGCGTGG CAAGGCAGTG CAGATGAATT GCTCTCGCTA
TTCCACTAG
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| Protein sequence | MNRLSPQEPI QLTQTAIESL FTPPTLMRAR DYVMQGRVLS AKANADFRHI EGTVTGTETT
PYRQDIRLVS VNHKLVMNGF CSCPASGNCK HMAAVLYSLL TDKTVEDQRI AQWLHLLDEA
DDPNVNDVES LYDDRVLYIL SKDDNGVFIE LRRGKLGKKG GYNKGTKIAL SDVQYYMPAW
IGAEDVLILN LIMSTRRHGA SRLYLKAQLG AVAIEKMLAT ERCFWEESRL ALTAGEAITP
QFLWQDIDSE HKQMRLVLPE RDNWELVPTE PPYYIELDYF HIGLIDTDIS VDKLRLLSQM
PPVPSTQVEL VSHRLIKHFS ARTVPPPSAI DFVELRDKLQ LRLTLKVVPA GTMPPGSALS
SATETRIAQP YLALEFVYGD LVLSGNAAKE ALTLVTQGGT TYQINRALEE ELQAVSKLQT
LGFSRFSLEG AANGASLWSL GHLPDAIREW LAFIDEEVPR LQTQGIEVRL APEFSLKVVD
TPLTVELDDS QEGWFSLSLH ADINGQRLPM LPLVATWLKQ HGEPADDAEL LLPSPSGEWL
KIKASVIKPL MSIIQELFEQ HRGHSIAIPK YRAHLLNELA ESEISLLNGE RVRQLATKLA
EFNGVVAVSA PTGLNAQLRA YQQQGLNWLC FLKEYQLGGI LADDMGLGKT IQTLAFLLKQ
QEAKSAGQPR LPSLIICPTS LVGNWAKEAA KFAPSLSLAV IHGAQRGPLL SRLSEFDVVV
TTYPLMVRDY DYYQTQPFEH IVLDEAQQIK NAQAKVSQQI KALQAPFRLC LTGTPLENHL
GELKSLMDFC LPGLLGTTAY FNKAFRYRIE RYGDGEQAKV LSQRIAPFVL RRTKAEVVTE
LPPKTEIYQT LELEKDQRNL YESIRLSMEK KIRELFASQG VAGSHIEFLD ALLKLRQACC
DPRLVKLEQA QKVKNNAKLN WLSQNLPEMV QEGRKILIFS QFTSMLILIE ELLQSLDIDY
SKLTGQTRLR QGQIDKFQEG DTPVFLISLK AGGTGLNLTA ADTVIHYDPW WNPAAEKQAT
DRAHRIGQEN PVFVYKLIAE GTVEEKIQEM QQHKQGLADS ILEGKGKGAW QGSADELLSL
FH
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