Gene Shewmr4_2615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2615 
Symbol 
ID4253186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3112287 
End bp3113021 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content51% 
IMG OID638119250 
Producthypothetical protein 
Protein accessionYP_734743 
Protein GI113970950 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.175692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000511139 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTTGGG TTAAGAAAGT TGTCTCTCAG GCAATCATGC CTATTCCATT TATCCTGTTG 
TTATTACTGC TATCTTTTTG GGTTTGGCGC AAACCTAGAT TAGCCAAATG GGCCATAGGC
GGTGCGTTTT CGCTGCTCCT AGTGCTCAGC AGCCAATTGA GTGTCGACTA TCTCGTTAAA
CCGCTCGAGA CTCAATATCC CATTAATTCC ACGCCTATTG CGGGTACCTG TGTGGTAATG
GTGTTGGGGT CAGCACACTC GGATATCCCA GGTGCAACGG CGGTACAATC TTTATCGGCG
GTCGCCTTAG CGCGGCTAAC GGAAGGACTG AGGCAACTCC AATTAGGTCA AGACTGCACT
TTAGTGGTCA GTGGTTGGGA GGGCGAGCTA ACGCAGCATC CCCACGCCGA AGTGATGGCC
AAGGCGGCGG TTGAACTCGG TGTCGATGCA TCACGTATCG TTCAATTGCC TCTGCCGCGC
GACACGATCG AAGAGGCGCA TTATTTTAAA GAACACTTTG GTAATCAAGC CGTGCGATTA
GTTACCTCGG CTTCCCATAT GCCAAGGTCG ATGGCGATCT TTAGCGGTCA AGGATTAACG
GCTAGCGCCG CACCGACGGA TTTTAGGGCC AGAGACGGTT TCTACTGGCG CTTGACTGCG
GATAACTTGC TCGCTTCGCA ACGGGCGATA CACGAATACA TAGGCCGTTT ATGGCTCTGG
ATTAAACAGG AATAA
 
Protein sequence
MFWVKKVVSQ AIMPIPFILL LLLLSFWVWR KPRLAKWAIG GAFSLLLVLS SQLSVDYLVK 
PLETQYPINS TPIAGTCVVM VLGSAHSDIP GATAVQSLSA VALARLTEGL RQLQLGQDCT
LVVSGWEGEL TQHPHAEVMA KAAVELGVDA SRIVQLPLPR DTIEEAHYFK EHFGNQAVRL
VTSASHMPRS MAIFSGQGLT ASAAPTDFRA RDGFYWRLTA DNLLASQRAI HEYIGRLWLW
IKQE