Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2615 |
Symbol | |
ID | 4253186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3112287 |
End bp | 3113021 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119250 |
Product | hypothetical protein |
Protein accession | YP_734743 |
Protein GI | 113970950 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.175692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000511139 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTTGGG TTAAGAAAGT TGTCTCTCAG GCAATCATGC CTATTCCATT TATCCTGTTG TTATTACTGC TATCTTTTTG GGTTTGGCGC AAACCTAGAT TAGCCAAATG GGCCATAGGC GGTGCGTTTT CGCTGCTCCT AGTGCTCAGC AGCCAATTGA GTGTCGACTA TCTCGTTAAA CCGCTCGAGA CTCAATATCC CATTAATTCC ACGCCTATTG CGGGTACCTG TGTGGTAATG GTGTTGGGGT CAGCACACTC GGATATCCCA GGTGCAACGG CGGTACAATC TTTATCGGCG GTCGCCTTAG CGCGGCTAAC GGAAGGACTG AGGCAACTCC AATTAGGTCA AGACTGCACT TTAGTGGTCA GTGGTTGGGA GGGCGAGCTA ACGCAGCATC CCCACGCCGA AGTGATGGCC AAGGCGGCGG TTGAACTCGG TGTCGATGCA TCACGTATCG TTCAATTGCC TCTGCCGCGC GACACGATCG AAGAGGCGCA TTATTTTAAA GAACACTTTG GTAATCAAGC CGTGCGATTA GTTACCTCGG CTTCCCATAT GCCAAGGTCG ATGGCGATCT TTAGCGGTCA AGGATTAACG GCTAGCGCCG CACCGACGGA TTTTAGGGCC AGAGACGGTT TCTACTGGCG CTTGACTGCG GATAACTTGC TCGCTTCGCA ACGGGCGATA CACGAATACA TAGGCCGTTT ATGGCTCTGG ATTAAACAGG AATAA
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Protein sequence | MFWVKKVVSQ AIMPIPFILL LLLLSFWVWR KPRLAKWAIG GAFSLLLVLS SQLSVDYLVK PLETQYPINS TPIAGTCVVM VLGSAHSDIP GATAVQSLSA VALARLTEGL RQLQLGQDCT LVVSGWEGEL TQHPHAEVMA KAAVELGVDA SRIVQLPLPR DTIEEAHYFK EHFGNQAVRL VTSASHMPRS MAIFSGQGLT ASAAPTDFRA RDGFYWRLTA DNLLASQRAI HEYIGRLWLW IKQE
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