Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2614 |
Symbol | |
ID | 4253185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3111587 |
End bp | 3112282 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119249 |
Product | hypothetical protein |
Protein accession | YP_734742 |
Protein GI | 113970949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.234616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000133675 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCTAG AGTCCGATGT TGTCTCGGTT CGCCCACTAT CTAAACGTAA TGGTTTAACC TTAACGATTG TGGGCGCCAG CGCCTTTGTC TTAGGTTTTG GCCTATTTGT ACTATTTCCC GAGCTATTTG CCGTGGGTTT AGTGTTTTTC AGCTTAGGTG CGATTGCGTT GATATTGGGC TTGGCGAAGG TGTATGAACC TGAGACCACC TTGAGCATGG ATGCGCAGGG ACTGACCTAT TTTCATCGCC GCGGCAAAGT CGCGATAAAC TGGAGTAACA TTCAACGGGT AGATATTCCT CGAGTCACTC AGGGGGTTGA TACCATTGAA CTTTCCTATA TTGGCATTAA GCTCAAACAG CTAAATCCTA TCCTAGATAA TATTTCATTG CGCCTTGCGG CGGGTTTATT GACTGAGCAG CGGCCGTTAT TGGTGACAGC AGCCTCACAG CAAGAGGATT TGGCGACCTT AGAAACCTAT CTTGGCGCCG AATTTAGCCC GCTCGTTATC GAGGGAGACC GTTACCGCGG CGTGTTGGCG ATGTTTGGTC ATCGTTGTGT GATGCTCAAT ACTCACCTTG GCTACCATCT CTATATTCCC CACGACAGCT TAGACCGTGA CCCTCGAGAG TTTATTAAGC TGTTAAGGCA ACGCATCGCG CAGAGTGTGA CTCAAATTGA TGTGACAACA CATTAA
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Protein sequence | MTLESDVVSV RPLSKRNGLT LTIVGASAFV LGFGLFVLFP ELFAVGLVFF SLGAIALILG LAKVYEPETT LSMDAQGLTY FHRRGKVAIN WSNIQRVDIP RVTQGVDTIE LSYIGIKLKQ LNPILDNISL RLAAGLLTEQ RPLLVTAASQ QEDLATLETY LGAEFSPLVI EGDRYRGVLA MFGHRCVMLN THLGYHLYIP HDSLDRDPRE FIKLLRQRIA QSVTQIDVTT H
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