| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2599 |
|---|
| Symbol | |
|---|
| ID | 4253170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3095670 |
|---|
| End bp | 3096104 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638119234 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734727 |
|---|
| Protein GI | 113970934 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3126] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000664036 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000856257 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAAG GGTTAAGGAT TAGCGGACTG ACATCTGCAT GGCAAAAATT AGCGGCTATT
GTGTTACTCG CCGCCACCAC GGTGATTTCA GGTTGTGCCA CACCTAATGC GATTGTCGAG
ATTAAAGGTG AGGCCATGTA CCGCGAGCGT ATCGCATTGC CCGTCGATGC CAAGTTGATT
GTGCAGTTGC TTGATGTCTC TAAGATGGAT GTGCCCGCCG TAGTTATGGC AGAGCGCGTT
TCCCAAGGAG CGAAAACCCC AACGCCGTTT AGTTTTTCGA TGGGGCGTGA TCAGTTTGAA
GCGGGGCATA CCTATGCCAT TGGGGCAAGG ATAATGCTCG GTGATAAGTT ATTGTTTATT
AATACTCAAG CCTATCATGT CGACCTCAAT TCGACAGAGC CTATGAAGAT ACTGCTTGAG
AAAGTCGGTC GCTAA
|
|---|
| Protein sequence | MRQGLRISGL TSAWQKLAAI VLLAATTVIS GCATPNAIVE IKGEAMYRER IALPVDAKLI
VQLLDVSKMD VPAVVMAERV SQGAKTPTPF SFSMGRDQFE AGHTYAIGAR IMLGDKLLFI
NTQAYHVDLN STEPMKILLE KVGR
|
|---|
| |