| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2596 |
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| Symbol | |
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| ID | 4253167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3091375 |
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| End bp | 3092874 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119231 |
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| Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
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| Protein accession | YP_734724 |
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| Protein GI | 113970931 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000530409 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACAC AAGTTAAGCA TTACATCGAT GGCGAATTCA CCACAGGCAC AGGAACATCA
CAAATCGTAG TGACCAATCC CGCCAATAAC GAGCCAATCG CCCTTATCAA TAGCGCTACG
GCCGATGAAG TGCACGCGGC TATTGCCAGT GCCAAGGCGG CTTTTAAGAC GTGGAAAGAA
GTGCCAGTAT CTGAGCGTGC CCGTGTCATG TTGCGCTACC AACACTTGTT AAAAGAACAC
CACGACGAAC TGGCGACTAT CCTTGCCAAA GAAACTGGCA AAACCTTTGA AGATGCCAAG
GGCGATGTGT GGCGCGGAAT TGAAGTGGCA GAACATGCCT GCAACATTGC CTCATTATTG
ATGGGCGAAA CCGTTGAGAA CGTCGCGCGT TCAATCGATA CCTACAGCTA CACTCAGCCT
CTGGGTGTGT GTGCGGGCAT CACGCCGTTT AACTTCCCAG CAATGATCCC TCTGTGGATG
TTCCCTCTGG CGATTGCCTG CGGTAACACT TTTATCCTTA AGCCATCAGA GCAAGACCCA
ATGACGCCGC AGCGCTTAGT TGAGCTGTTT GTCGAAGCGG GCGCGCCAAA GGGCGTATTA
CAGCTGGTAC ATGGCGATAA GACGGCGGTC GATATCCTGC TGGCAGACCC TGCGGTGAAA
GCCATTTCCT TCGTCGGCTC TGTGGCTGTA GGTCAATACA TCTACAAAAC CGGTACCGAT
AACTTAAAAC GCGTGCAAGC CTTTGCTGGT GCGAAAAACC ACTGCGTGAT CATGCCTGAT
GCGAATAAGC AGCAAGTCAT CAACAACCTA GTGGGCGCAT CGGTTGGCGC GGCGGGTCAA
CGCTGTATGG CGATTTCGGT CGCGGTATTT GTCGGCGCGG CTAAAGAGTG GATCCCAGAG
CTTAAAGAAG CGCTGGCGAA GGTTCGCCCA GGTTTATGGG ACGATAAAGA AGCCGGTTAC
GGCCCGCTGA TTAGCCCAGC CGCTAAAGCA CGCGTGCTCA AACTTATCGC CCAAGGTAAG
GAAGAAGGCG CAGAGTGTTT ACTCGATGGC AGCGATTTTA GCGTGGCAGG TTTCGAGTCG
GGTAACTGGG TAGGACCGAC CATGTTCACT AAGGTCACGA CCGATATGAG CATCTACAAA
GAAGAAATCT TCGGCCCTGT GCTTTGCTGT ATGGAGTCCG ATTCATTAGA AGATGCCATC
GAACTGGTTA ACGCCAGCCC TTACGGCAAT GGTACCTCTA TCTTTACCGC AAGCGGCGCC
GCCGCCCGTA AATATCAACA CGAAATCGAA GTTGGCCAAG TCGGTATCAA CGTGCCTATC
CCTGTGCCAT TACCTTTCTT CTCGTTCACG GGTTGGAAGG GCAGTTTCTA TGGCGACCAA
CACGCTTACG GTAAGCAAGC GGTACGTTTC TACACTGAAA CTAAGACCAT TACCTCTCGC
TGGTTCGAGT CGGACATTGC CGTGGCCGCA GGTCCCAATA TGAGCATTAA CTTGCGCTAA
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| Protein sequence | MTTQVKHYID GEFTTGTGTS QIVVTNPANN EPIALINSAT ADEVHAAIAS AKAAFKTWKE
VPVSERARVM LRYQHLLKEH HDELATILAK ETGKTFEDAK GDVWRGIEVA EHACNIASLL
MGETVENVAR SIDTYSYTQP LGVCAGITPF NFPAMIPLWM FPLAIACGNT FILKPSEQDP
MTPQRLVELF VEAGAPKGVL QLVHGDKTAV DILLADPAVK AISFVGSVAV GQYIYKTGTD
NLKRVQAFAG AKNHCVIMPD ANKQQVINNL VGASVGAAGQ RCMAISVAVF VGAAKEWIPE
LKEALAKVRP GLWDDKEAGY GPLISPAAKA RVLKLIAQGK EEGAECLLDG SDFSVAGFES
GNWVGPTMFT KVTTDMSIYK EEIFGPVLCC MESDSLEDAI ELVNASPYGN GTSIFTASGA
AARKYQHEIE VGQVGINVPI PVPLPFFSFT GWKGSFYGDQ HAYGKQAVRF YTETKTITSR
WFESDIAVAA GPNMSINLR
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