| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2592 |
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| Symbol | |
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| ID | 4253163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3087064 |
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| End bp | 3087966 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638119227 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_734720 |
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| Protein GI | 113970927 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00101214 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACAG TAGCATTTAT CGGTTTAGGT AATATGGGCG GCCCAATGGC GGCCAATTTA
TTAAAAGCGG GCATGACGGT ACGTGTCTTC GACTTAGTGC CAGCCGCCAT GCAAGCCTTG
GCCGACCAAG GCGCTTTAGT GTCGAGCACG GCATGCGGCG CGGCGGCGGG GGCCAATGTG
GTGATCACTA TGCTGCCTGC GGGTAAGCAT GTTCGAAACT TGTACTTAGG TAATGCTAGT
GAGAAGGGGC TACTCGACGT AGTCGCTGGC GATACCTTGC TGATTGATTG CTCGACCATT
GACGCCCAAA GTGCTCAGTT GGTGGCAGCC GAAGCGGCCA AGAGCGGTAT CGAGTTTATC
GATGCGCCAG TATCGGGCGG TACGGCGGGC GCGGCGGCAG GCACCTTGAC CTTTATCTGT
GGTGGTTCGG ACATCGCCTT TGAGCGCGCG CAACCCGTTC TCAATGCCAT GGGCAAGAAT
ATCTTCCATG CGGGCGGCGC CGGTGCGGGT CAGGTCGCTA AAATCTGCAA CAACATGCTG
TTATCTGTGT TGATGGTCGG CACTTCTGAG GCGCTACAAA TGGGGATTGA CCATGGTCTC
GACCCTAAAG TGCTGTCGGA CATTATGAAG GTCAGTAGCG GCGGTAACTG GACGTTAGAG
AAGTACAATC CTTGCCCAGG CGTGATGGAG AATGTGCCTT CTTCTAAGGA CTATCAGGGC
GGCTTTATGG TAGATTTGAT GGTAAAAGAT CTCGGCCTCT CCCAGGAAGC TGCATTATTG
AGCAATTCGA GCACGCCAAT GGGCTCACTC GCGCGCAGCT TGTATGTGAA TCATGCAAGA
CAAGGCAATG GTCGCCGAGA CTTCTCCAGT ATTTTTGAAC AATTTGCACC ACTTAAAAAA
TAG
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| Protein sequence | MSTVAFIGLG NMGGPMAANL LKAGMTVRVF DLVPAAMQAL ADQGALVSST ACGAAAGANV
VITMLPAGKH VRNLYLGNAS EKGLLDVVAG DTLLIDCSTI DAQSAQLVAA EAAKSGIEFI
DAPVSGGTAG AAAGTLTFIC GGSDIAFERA QPVLNAMGKN IFHAGGAGAG QVAKICNNML
LSVLMVGTSE ALQMGIDHGL DPKVLSDIMK VSSGGNWTLE KYNPCPGVME NVPSSKDYQG
GFMVDLMVKD LGLSQEAALL SNSSTPMGSL ARSLYVNHAR QGNGRRDFSS IFEQFAPLKK
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