| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2585 |
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| Symbol | |
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| ID | 4253156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3078160 |
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| End bp | 3078690 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119220 |
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| Product | Lipocalin family protein |
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| Protein accession | YP_734713 |
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| Protein GI | 113970920 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3040] Bacterial lipocalin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0822129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAC TACTCTTACT TATCAGTGTA TTAGTGCTAT CGGGTTGTTT GGGCATGCCA
CGCAATGTCG AACCCGTTAA GGATTTTCAG CTAGAGCGTT ACTTGGGCAA ATGGTATGAA
ATTGCGAGGC TCGACCATTC CTTCGAGCGC GGATTAACCC AAGTGACCGC CGAATACAGC
CTTAAAGCCG ATGGCGGGGT GAAGGTCATT AATCGGGGTT ATTCTGCCGA TACCCAGCAA
TGGAAAGAGG CCGAGGGTAA GGCCTATTTT GTCAATGGCG ACGAGGAAGC CTATTTAAAG
GTCTCCTTCT TCGGGCCATT TTATGGCTCC TATGTGGTCT TTGGGCTCGA CCAGCAAGAT
TACCAATACG CCTTTATCTC TGGGCCGGAT ACGGATTATT TATGGCTATT GGCAAGAACC
CCGACCGTAT CCCCAGAGGT GATGAAGCAA TTTGTCGAGA TGGCAAGCGC CCGCGGCTTT
GATACCAACA GCTTGATTTA TGTCGAGCAA AAAGCTGAAG TTAAGCCATA A
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| Protein sequence | MKKLLLLISV LVLSGCLGMP RNVEPVKDFQ LERYLGKWYE IARLDHSFER GLTQVTAEYS
LKADGGVKVI NRGYSADTQQ WKEAEGKAYF VNGDEEAYLK VSFFGPFYGS YVVFGLDQQD
YQYAFISGPD TDYLWLLART PTVSPEVMKQ FVEMASARGF DTNSLIYVEQ KAEVKP
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