| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2570 |
|---|
| Symbol | |
|---|
| ID | 4253141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 3057539 |
|---|
| End bp | 3059104 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638119205 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_734698 |
|---|
| Protein GI | 113970905 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA CCAAAATCGC GAGTGCCGTT ATTGCCTTAT CTGTGGGCGT TATTGCCCAA
GCCCATGCCG ACGATAATCG TTATGTCATC CAAGTAGAAG CGGGTCATGC AGGCATTGTG
AAGGCACTGG CTAAAAAATT AGGTGCTGAA ATCAATCTTG AAGGGGATGA ATTTATTGCA
GCGACTTTTA CCGGTAAAGA TCTCGCCCAA GTAAAAGGCC TGCTAAACAA TCCACATATC
ACCCTGATTG AAGAAGACGT TCGCCGTCAT CCTATGGCGT TGTATAACGA CGATGCGGGC
AATCCAATGA CCCAGCAAGT CACGCCGTAT GCGGTATATC AATCCCATGC CAACGAAGTG
ACCTTTAACC CAAATGCGGG CATGAAGGTG TGTATTATTG ACTCTGGTTT AGATAGCTCA
AACCCTGACT TTAACTGGAA CAACATCACT GGCGACAGCG ACCCAGGCAC GGGTAACTGG
TTCCAAAATG GTGGCCCACA CGGCACTCAC GTAGCGGGTA CTATTGGTGC GGCAGACAAC
AATATCGGTG TAGTCGGTAT GGCGCCAGGC GTACCTATGC ACATCGTAAA AGTATTCAAC
GCATCGGGCT GGGGTTACTC CTCTGACTTA GCCTATGCAG CCAACAAATG TAGCAATGCT
GGCGCTAAGA TCATCAGCAT GAGTTTAGGT GGCGGCGCAG CTAACAATAC TGAAAAGAAT
GCCTTCGACG CCTTTACTGC GGCGGGTGGT TTAGTGGTCG CGGCAGCGGG TAACGACGGT
AACTCAGTGC GCTCTTATCC AGCAGGTTAT CCATCTGTCA TGATGATCGG TGCTAACGAT
GCCAACAATA ACATTGCCGA CTTCTCCCAA TACCCAAGCT GCGTGAGCGG TCGTGGTAAA
AAAGCCGTCA ACGATGATGG CATCTGTGTT GAAGTTACCG CCGGTGGTGT CGATACCCTT
TCAACCTACC CAGCAGGCAT GGCAACGGCG TCAACCTTAA CTGCCGATGG CGCGACAGTT
GCGTCATCAG CGATGGAAAA CCCAGGTTCA GCCACAGGCA ATACCTACTT TATGGGCACG
GCTCAAGCCG TGGATTCTGG CGCGAACGGT AAGATTTGCG TAATCGATCG CGGCGTGATT
TCCTTCCACG ATAAAGTACT TAACTGTGAA AACTCAGGCG GTGTCGGCGC AATCGTTATC
AACAACGTCG CGGGCATGCT CTACGGCACT TTGGGTGATA CCAACGCCAC CACCATTCCT
GCAGTTGGCG CAGCTTTCGA AGATAGAGCG AGCCTAATCG CTGCACAAAA CGCAACGGTT
TCAATCGATT CGGTTGACTA CGGCTTTATG AGCGGTACTT CAATGGCGAC ACCAGCAGTA
TCGGGTATGG CGGCACTGGT ATGGTCTAAC CATTCACAAT GTACTGGTAC ACAAATCCGT
AAGGCACTCA AAGCGACAGC GATGGATGCG GGCACTGTGG GCAAGGATAA CTACTTCGGT
TATGGTATCG TCAACGCGAA AGCGGCCGAT GCTTACCTCA CCACCTATGG CTGCTCTGGC
AAATAG
|
|---|
| Protein sequence | MKLTKIASAV IALSVGVIAQ AHADDNRYVI QVEAGHAGIV KALAKKLGAE INLEGDEFIA
ATFTGKDLAQ VKGLLNNPHI TLIEEDVRRH PMALYNDDAG NPMTQQVTPY AVYQSHANEV
TFNPNAGMKV CIIDSGLDSS NPDFNWNNIT GDSDPGTGNW FQNGGPHGTH VAGTIGAADN
NIGVVGMAPG VPMHIVKVFN ASGWGYSSDL AYAANKCSNA GAKIISMSLG GGAANNTEKN
AFDAFTAAGG LVVAAAGNDG NSVRSYPAGY PSVMMIGAND ANNNIADFSQ YPSCVSGRGK
KAVNDDGICV EVTAGGVDTL STYPAGMATA STLTADGATV ASSAMENPGS ATGNTYFMGT
AQAVDSGANG KICVIDRGVI SFHDKVLNCE NSGGVGAIVI NNVAGMLYGT LGDTNATTIP
AVGAAFEDRA SLIAAQNATV SIDSVDYGFM SGTSMATPAV SGMAALVWSN HSQCTGTQIR
KALKATAMDA GTVGKDNYFG YGIVNAKAAD AYLTTYGCSG K
|
|---|
| |