Gene Shewmr4_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2562 
Symbol 
ID4253133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3050460 
End bp3051368 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content51% 
IMG OID638119197 
Producthypothetical protein 
Protein accessionYP_734690 
Protein GI113970897 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCATA GAGACTGTAT CTTGCCTGCC AATTTTTTAC TCCTGCTCGC CGCCGCTATC 
TGGGGCTTTG GTTTTGTCGC CCAAACCTTA GGGATGGAGC ATTTATCGCC GTTTGCATTC
AACGGGCTAC GTTTCTTAAT TGGTACTGTG TCACTCGTTC CTCTGGTGTG GTACTTGGCT
CGGCAAGGCA AAATTCATCT CGGTACACCC AAAGATTTTG CCATTGGCTG TGTTGCGGTG
GGCGGACTGT TATTTGCTGG CGCATCGCTA CAACAGGTGG GACTGCTTTA TACCACGGCC
GCTAACGCGG GCTTTATCAC TGGGCTTTAT ATCGTGTTAG TGCCGATATT GGGCTTAGCC
CTGAAACATG CTACCGGCGC CAATACCTGG GTGGGCTGTG GTATCGCCGT GGTGGGGCTG
TATTTTTTAA GCATTAAAGA CGGCTTTCAC CTCGGTTATG GTGATACGCT GCAATTGATT
GGCGCACTGT TTTGGGCGAT GCATATTTTG GCGGTGGATC ATTTTGCCAA GCGAATTTCG
CCTGTGTTAC TCGCCATGAT GCAGTTTTTG GTGTGCGGCG TGTTAAGCCT ACTTGTGTCG
GCGGCCATTG AGGTCACGAC AGTCGATAAG GTGATTGCAG CTTGGGGCTC ACTGGCCTAC
GCGGGGCTGA TTTCAGTGGG TATTGCCTAC ACTTTACAGG TGCTGGCGCA AAAGCATGCT
CATCCTGCGC ACGCGGCGAT TATTTTGAGT TTAGAAACCG TGTTTGCGGC CATCGGCGGT
ATTCTGTTCC TTGGTGAAAG CTTAGGACTG CGCGCCTTGT TTGGGTGCGG CTTGATGCTG
CTGGGGATGT TGATTTCCCA AGTGCCGCTG CGCTATTTGA TTAAGTCTCG GCACCAGAAA
GTCAGTTAA
 
Protein sequence
MNHRDCILPA NFLLLLAAAI WGFGFVAQTL GMEHLSPFAF NGLRFLIGTV SLVPLVWYLA 
RQGKIHLGTP KDFAIGCVAV GGLLFAGASL QQVGLLYTTA ANAGFITGLY IVLVPILGLA
LKHATGANTW VGCGIAVVGL YFLSIKDGFH LGYGDTLQLI GALFWAMHIL AVDHFAKRIS
PVLLAMMQFL VCGVLSLLVS AAIEVTTVDK VIAAWGSLAY AGLISVGIAY TLQVLAQKHA
HPAHAAIILS LETVFAAIGG ILFLGESLGL RALFGCGLML LGMLISQVPL RYLIKSRHQK
VS