Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2562 |
Symbol | |
ID | 4253133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3050460 |
End bp | 3051368 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119197 |
Product | hypothetical protein |
Protein accession | YP_734690 |
Protein GI | 113970897 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATCATA GAGACTGTAT CTTGCCTGCC AATTTTTTAC TCCTGCTCGC CGCCGCTATC TGGGGCTTTG GTTTTGTCGC CCAAACCTTA GGGATGGAGC ATTTATCGCC GTTTGCATTC AACGGGCTAC GTTTCTTAAT TGGTACTGTG TCACTCGTTC CTCTGGTGTG GTACTTGGCT CGGCAAGGCA AAATTCATCT CGGTACACCC AAAGATTTTG CCATTGGCTG TGTTGCGGTG GGCGGACTGT TATTTGCTGG CGCATCGCTA CAACAGGTGG GACTGCTTTA TACCACGGCC GCTAACGCGG GCTTTATCAC TGGGCTTTAT ATCGTGTTAG TGCCGATATT GGGCTTAGCC CTGAAACATG CTACCGGCGC CAATACCTGG GTGGGCTGTG GTATCGCCGT GGTGGGGCTG TATTTTTTAA GCATTAAAGA CGGCTTTCAC CTCGGTTATG GTGATACGCT GCAATTGATT GGCGCACTGT TTTGGGCGAT GCATATTTTG GCGGTGGATC ATTTTGCCAA GCGAATTTCG CCTGTGTTAC TCGCCATGAT GCAGTTTTTG GTGTGCGGCG TGTTAAGCCT ACTTGTGTCG GCGGCCATTG AGGTCACGAC AGTCGATAAG GTGATTGCAG CTTGGGGCTC ACTGGCCTAC GCGGGGCTGA TTTCAGTGGG TATTGCCTAC ACTTTACAGG TGCTGGCGCA AAAGCATGCT CATCCTGCGC ACGCGGCGAT TATTTTGAGT TTAGAAACCG TGTTTGCGGC CATCGGCGGT ATTCTGTTCC TTGGTGAAAG CTTAGGACTG CGCGCCTTGT TTGGGTGCGG CTTGATGCTG CTGGGGATGT TGATTTCCCA AGTGCCGCTG CGCTATTTGA TTAAGTCTCG GCACCAGAAA GTCAGTTAA
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Protein sequence | MNHRDCILPA NFLLLLAAAI WGFGFVAQTL GMEHLSPFAF NGLRFLIGTV SLVPLVWYLA RQGKIHLGTP KDFAIGCVAV GGLLFAGASL QQVGLLYTTA ANAGFITGLY IVLVPILGLA LKHATGANTW VGCGIAVVGL YFLSIKDGFH LGYGDTLQLI GALFWAMHIL AVDHFAKRIS PVLLAMMQFL VCGVLSLLVS AAIEVTTVDK VIAAWGSLAY AGLISVGIAY TLQVLAQKHA HPAHAAIILS LETVFAAIGG ILFLGESLGL RALFGCGLML LGMLISQVPL RYLIKSRHQK VS
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