| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2545 |
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| Symbol | |
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| ID | 4253116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3029074 |
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| End bp | 3030201 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119180 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_734673 |
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| Protein GI | 113970880 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA ATTTTTCTCT TCTCCAAACC GATGCGACGC AAACTGGCCG CTGCGATAAT
CTCGTCCAAG CAGGCTTTGA GCCGCGTGAG CAAGTCGCGC TTAATGCCTT AGCGACTAAG
ATCAGCCATG CCTTTGTCAC TGGCGCGGGC GGATTTTTGG GGAAGGCGAT TTGTCAGCGT
TTAATCGCAG CCGGTATTAA GGTCACAGGC TTTGCCCGCT GCCATTACCC TGAGCTTGAA
GCCCTTGGCG TGACTATGGT GCAGGGGGAT TTAGTCAATC CAGAGCAAGT TAAACAGGCG
ATGCAGGGCT GTGATATCGT ATTTCATGTG GCGTCAAAGG CGGGTGTCTG GGGCGATAGA
GACAGCTATT TTTGCCCCAA TGTGAAGGGC GCCGCCAATG TGATTGCCGC TTGTAAGGCG
CTTAAAATTG GTAAATTAGT CTATACCAGC ACTCCAAGCG TGACCTTTGC GGGCGAGGAT
GAATCGGGTA TCGATGAGTC AACGCCCTAC GCCAGCCGCT TTTTAAATTA TTATGCCCAT
TCCAAGGCCA TCGCCGAGAA AATGATGCTC GATGCTAATC AAGCATCGAC AACAACGTCG
GCGTTTGCGT TAAAGACAGT CGCCCTGCGG CCGCATTTAA TCTGGGGGCC GAATGATCCG
CATTTGGTGC CACGGGTGCT CGCCCGTGGT CGTTTGGGTA AACTCAAGCT GGTGGGGCGC
GAGGATAAAC TGGTCGATAC CATTTATATC GATAACGCCG CCTATGCCCA TATTCTGGCT
GCCGTGGAGC TTTGCCAAGT CTCGCCAAAG TGCCAAGGAA AAGCCTATTT TGTCAGTAAC
GACGAGCCTG TGACTATGGC CAAGATGCTG AACCTCATCT TAGCCTGCGA TGGACTTGCG
CCTGTAACTA AGCGAGTGCC ACAGACGCTG GCCTATGTGG TGGGCACAGT GTTAGAAACG
GCGTATCGGC TGCTGAAAAA GCAAGAAGAG CCGATAATGA CGCGCTTTGT CGCTAAACAG
CTTTCCTGTA GCCATTATTT CGATATCAGT GCAGCAAAAC GGGACTTTGG CTATCACGCC
CTAGTGTCGA TAGAAGAGGG GATGAAGCGT CTTAAGGCAT CGCTCTAG
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| Protein sequence | MTDNFSLLQT DATQTGRCDN LVQAGFEPRE QVALNALATK ISHAFVTGAG GFLGKAICQR
LIAAGIKVTG FARCHYPELE ALGVTMVQGD LVNPEQVKQA MQGCDIVFHV ASKAGVWGDR
DSYFCPNVKG AANVIAACKA LKIGKLVYTS TPSVTFAGED ESGIDESTPY ASRFLNYYAH
SKAIAEKMML DANQASTTTS AFALKTVALR PHLIWGPNDP HLVPRVLARG RLGKLKLVGR
EDKLVDTIYI DNAAYAHILA AVELCQVSPK CQGKAYFVSN DEPVTMAKML NLILACDGLA
PVTKRVPQTL AYVVGTVLET AYRLLKKQEE PIMTRFVAKQ LSCSHYFDIS AAKRDFGYHA
LVSIEEGMKR LKASL
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