Gene Shewmr4_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2543 
Symbol 
ID4253114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3027304 
End bp3028287 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content47% 
IMG OID638119178 
Productintegral membrane protein TerC 
Protein accessionYP_734671 
Protein GI113970878 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTT TAACCACGCT ATTTGTGGGT TACCCGATAT GGGTTTGGTT AATGTTTTTT 
GGCTTTGTGC TGGCATTGTT AGCCTTCGAC TTAGGTGTGC TACACAAAGA GCAACATGAA
ATTACCGTGG CAGAGAGCCT TAAATTATCG GCCTTTTATA TCTGTATGGG GCTGTTGTTC
GGCGCTTGGT TATGGTGGTA CAAGGGCTCG ACCGCGGGGA TGGAATACCT CACGGGTTAC
CTTATCGAAA AATCCTTATC TATGGATAAC GTCTTCGTTA TCGCGCTTAT TTTCAGTAGC
TTAGGCATTC CCCGGTTGTA TCAACACCGG GTGTTATTCT GGGGGATCAT GGGCGTTATC
GTGCTACGGG CGATTATGAT TGGCTTAGGC GCGGCGCTGG TGGCGCAATA CCAAGGCGTG
TTGGTGTTAT TCGGCCTGTT TTTGATTTTC ACGGGTATTA AGATGCTCTT CTCCGATGAT
GAGCATGGTG ATATCCAAGA TAATAAGTTT TACAAGTGGT TACGCTCTAA AATGCGCTTT
ACCCCAAGCC TACATAAAGA GAAGTTTTGG GTAAGGGGAG AGGAGCATCA GCTCAGTAAA
GGTTGGTGGG CAACACCTCT GTTCTTGGCG TTGATCTTAG TCGAAACCGC GGATCTGGTG
TTTGCGGTGG ACAGTATCCC TGCGATTTTT GCGATCACTC AAGATCCCTT TATCGTCTAT
ACCTCTAACA TCTTTGCGAT TTTAGGCCTG AGGGCATTGT ATTTTGCCCT AGCTGCTATG
GTGCACCGTT TCGAGTATCT CAAGTACGCA CTGTCGGTCG TGTTGGTGTT TATCGGCGTG
AAAGTCGGAC TGGTGTACTT TAATCATGAA GGTATTGTGG ACTTTAAGAT CCCTACGGCC
TTATCCCTTG GCGTCACCTT CGGCCTCTTG CTGGCGGGAG TTCTATTCTC CCTGTGGAAG
ACGCGCGAGC AGAAAGCAGA TTAA
 
Protein sequence
MEFLTTLFVG YPIWVWLMFF GFVLALLAFD LGVLHKEQHE ITVAESLKLS AFYICMGLLF 
GAWLWWYKGS TAGMEYLTGY LIEKSLSMDN VFVIALIFSS LGIPRLYQHR VLFWGIMGVI
VLRAIMIGLG AALVAQYQGV LVLFGLFLIF TGIKMLFSDD EHGDIQDNKF YKWLRSKMRF
TPSLHKEKFW VRGEEHQLSK GWWATPLFLA LILVETADLV FAVDSIPAIF AITQDPFIVY
TSNIFAILGL RALYFALAAM VHRFEYLKYA LSVVLVFIGV KVGLVYFNHE GIVDFKIPTA
LSLGVTFGLL LAGVLFSLWK TREQKAD