Gene Shewmr4_2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2541 
Symbol 
ID4253112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3024576 
End bp3026297 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content53% 
IMG OID638119176 
Productphosphoglucomutase/phosphomannomutase alpha/beta/subunit 
Protein accessionYP_734669 
Protein GI113970876 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC ATTTGCAATT ACAGGTTAAG CATTGGCTCG AAAATGACCC AGATCCCCGC 
ACTCAGGCAC AACTGCAAGC CTTAATCGAC GCCGGAAATG ACACCGAACT CGAGGCACGT
TTTGCGGGAC GTTTAGAATT TGGAACCGCC GGATTACGCG GTGTAGTGGG CGCAGGTCCT
ATGGGCATGA ATCGCTTGGT TATCCGCCAA ACGTCTGCAG GGCTTGGTAC CTATCTACTT
GAACAAATTA AAGATGCTGC CGAGCGCGGA GTCGTGATTG GATACGATGG CCGTCACGAT
TCACGCACTT TCGCCCATGA TACCGCCAGT GTGCTCACCG CGATGGGGAT TAAAGTGCGC
CTCACCGCCA AAGTGGCACC AACGCCGCTG GTGGCCTTTG GGGTTAAGCA TTTTAATGCC
GCCGCCGGTA TTGTGGTGAC CGCCAGCCAT AACCCGCCAC AATACAATGG CTACAAAGTG
TATTGGGAAA ACGGCGCGCA GATTATCCCG CCCCATGACT CAGGTATCGC CGCTCAAATT
GAGCTGGCGG CAACCCAAGC AATTCCGTTT ATGGATCAGG TGGAGGCGAC CAAACAGGGC
AAGCTTATCT GGTTGCAGGA CGATTATTAC GAAACCTATC GCCGCGGCGT GATGCACGCC
AATGTGCTGC AAAATAACAC CGCGCCTGAA AAAGTCAGTC TTGCCTATAC CGCGATGCAC
GGAGTGGGCG CAGAAATGGC TGAAACCGTG CTCAAGGATG CGGGTTTTAC CCAAGTGTAT
TCGGTGGCGG CGCAGCGCGA ACCTGATGGC GATTTCCCAA CGGTTAATTT CCCGAATCCG
GAAGAAAAAG GTGCGATGGA CTTAGTCATC GCCGAAGCGA AAAAGCATGG TGCTATGCTT
GCCTGCGCCA ATGACCCCGA TGCCGACAGA TTCGCGGTTG CTGTACGTAA GGATGATGGC
GAGTATCAAA TGCTAACGGG CGACCAAGTG GGCGTGCTCT TTGGCCATTA TCTGTTAAGC
CATGCCGCGA AAGACCAACG TCTGGTGGGC ACCACCATTG TGTCCTCCAG TCTATTATCT
AAAATCGCCA AAGGCTTTGG CGTTGAAAGT TATACCACGC TCACCGGTTT TAAATGGCTG
ATGAATGTGG GGATTGCGCA GACTCAGCCT GATAATCAAT TCCTGTTTGC CTACGAAGAG
GCGCTGGGTT ACACCGTCGG TAACATGGTG TGGGATAAGG ACGGCCTATC GGCATTAGTC
GCCTTCGCCC AATTAACCGC CGAGCTTGCC GCCAAAGGGC AAAGCATTTG GGATAGACTC
GAACAGATAT ACCGCGAGCA GGGTTTCCAT CTCAATGCTC AAGTTAGCAT TGCCTTAAAA
CCCGACACGC CTAATATCGG CGCCTATCTG CGTGAACATC CGCCGCTGGC AATTGGTGAA
CATGCCGTGG TGTCGACCGA TGATCTCAAG GCGTTAGAGC GCCGTTTTGC CGATGGCAAG
GTCGAGAAAA TCAATCTGCC CGCCAGTGAC GTATTAACCT ATCGCTTAGC CAATGGCGCG
CGGGTGATAG TACGGCCATC GGGCACTGAG CCAAAAATCA AGTGCTATTA CGAGGTGGTC
GAGCCTATGA CGGCGCAAGA CACCTTGGCC AGCGCCCAAG CTCGGGCAAC TCAGGCGATG
GAGGCGTTTA TTTCAGCCCA TCAGGCGAGC CTACCTAAAT AA
 
Protein sequence
MNTHLQLQVK HWLENDPDPR TQAQLQALID AGNDTELEAR FAGRLEFGTA GLRGVVGAGP 
MGMNRLVIRQ TSAGLGTYLL EQIKDAAERG VVIGYDGRHD SRTFAHDTAS VLTAMGIKVR
LTAKVAPTPL VAFGVKHFNA AAGIVVTASH NPPQYNGYKV YWENGAQIIP PHDSGIAAQI
ELAATQAIPF MDQVEATKQG KLIWLQDDYY ETYRRGVMHA NVLQNNTAPE KVSLAYTAMH
GVGAEMAETV LKDAGFTQVY SVAAQREPDG DFPTVNFPNP EEKGAMDLVI AEAKKHGAML
ACANDPDADR FAVAVRKDDG EYQMLTGDQV GVLFGHYLLS HAAKDQRLVG TTIVSSSLLS
KIAKGFGVES YTTLTGFKWL MNVGIAQTQP DNQFLFAYEE ALGYTVGNMV WDKDGLSALV
AFAQLTAELA AKGQSIWDRL EQIYREQGFH LNAQVSIALK PDTPNIGAYL REHPPLAIGE
HAVVSTDDLK ALERRFADGK VEKINLPASD VLTYRLANGA RVIVRPSGTE PKIKCYYEVV
EPMTAQDTLA SAQARATQAM EAFISAHQAS LPK