Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2541 |
Symbol | |
ID | 4253112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3024576 |
End bp | 3026297 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119176 |
Product | phosphoglucomutase/phosphomannomutase alpha/beta/subunit |
Protein accession | YP_734669 |
Protein GI | 113970876 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCC ATTTGCAATT ACAGGTTAAG CATTGGCTCG AAAATGACCC AGATCCCCGC ACTCAGGCAC AACTGCAAGC CTTAATCGAC GCCGGAAATG ACACCGAACT CGAGGCACGT TTTGCGGGAC GTTTAGAATT TGGAACCGCC GGATTACGCG GTGTAGTGGG CGCAGGTCCT ATGGGCATGA ATCGCTTGGT TATCCGCCAA ACGTCTGCAG GGCTTGGTAC CTATCTACTT GAACAAATTA AAGATGCTGC CGAGCGCGGA GTCGTGATTG GATACGATGG CCGTCACGAT TCACGCACTT TCGCCCATGA TACCGCCAGT GTGCTCACCG CGATGGGGAT TAAAGTGCGC CTCACCGCCA AAGTGGCACC AACGCCGCTG GTGGCCTTTG GGGTTAAGCA TTTTAATGCC GCCGCCGGTA TTGTGGTGAC CGCCAGCCAT AACCCGCCAC AATACAATGG CTACAAAGTG TATTGGGAAA ACGGCGCGCA GATTATCCCG CCCCATGACT CAGGTATCGC CGCTCAAATT GAGCTGGCGG CAACCCAAGC AATTCCGTTT ATGGATCAGG TGGAGGCGAC CAAACAGGGC AAGCTTATCT GGTTGCAGGA CGATTATTAC GAAACCTATC GCCGCGGCGT GATGCACGCC AATGTGCTGC AAAATAACAC CGCGCCTGAA AAAGTCAGTC TTGCCTATAC CGCGATGCAC GGAGTGGGCG CAGAAATGGC TGAAACCGTG CTCAAGGATG CGGGTTTTAC CCAAGTGTAT TCGGTGGCGG CGCAGCGCGA ACCTGATGGC GATTTCCCAA CGGTTAATTT CCCGAATCCG GAAGAAAAAG GTGCGATGGA CTTAGTCATC GCCGAAGCGA AAAAGCATGG TGCTATGCTT GCCTGCGCCA ATGACCCCGA TGCCGACAGA TTCGCGGTTG CTGTACGTAA GGATGATGGC GAGTATCAAA TGCTAACGGG CGACCAAGTG GGCGTGCTCT TTGGCCATTA TCTGTTAAGC CATGCCGCGA AAGACCAACG TCTGGTGGGC ACCACCATTG TGTCCTCCAG TCTATTATCT AAAATCGCCA AAGGCTTTGG CGTTGAAAGT TATACCACGC TCACCGGTTT TAAATGGCTG ATGAATGTGG GGATTGCGCA GACTCAGCCT GATAATCAAT TCCTGTTTGC CTACGAAGAG GCGCTGGGTT ACACCGTCGG TAACATGGTG TGGGATAAGG ACGGCCTATC GGCATTAGTC GCCTTCGCCC AATTAACCGC CGAGCTTGCC GCCAAAGGGC AAAGCATTTG GGATAGACTC GAACAGATAT ACCGCGAGCA GGGTTTCCAT CTCAATGCTC AAGTTAGCAT TGCCTTAAAA CCCGACACGC CTAATATCGG CGCCTATCTG CGTGAACATC CGCCGCTGGC AATTGGTGAA CATGCCGTGG TGTCGACCGA TGATCTCAAG GCGTTAGAGC GCCGTTTTGC CGATGGCAAG GTCGAGAAAA TCAATCTGCC CGCCAGTGAC GTATTAACCT ATCGCTTAGC CAATGGCGCG CGGGTGATAG TACGGCCATC GGGCACTGAG CCAAAAATCA AGTGCTATTA CGAGGTGGTC GAGCCTATGA CGGCGCAAGA CACCTTGGCC AGCGCCCAAG CTCGGGCAAC TCAGGCGATG GAGGCGTTTA TTTCAGCCCA TCAGGCGAGC CTACCTAAAT AA
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Protein sequence | MNTHLQLQVK HWLENDPDPR TQAQLQALID AGNDTELEAR FAGRLEFGTA GLRGVVGAGP MGMNRLVIRQ TSAGLGTYLL EQIKDAAERG VVIGYDGRHD SRTFAHDTAS VLTAMGIKVR LTAKVAPTPL VAFGVKHFNA AAGIVVTASH NPPQYNGYKV YWENGAQIIP PHDSGIAAQI ELAATQAIPF MDQVEATKQG KLIWLQDDYY ETYRRGVMHA NVLQNNTAPE KVSLAYTAMH GVGAEMAETV LKDAGFTQVY SVAAQREPDG DFPTVNFPNP EEKGAMDLVI AEAKKHGAML ACANDPDADR FAVAVRKDDG EYQMLTGDQV GVLFGHYLLS HAAKDQRLVG TTIVSSSLLS KIAKGFGVES YTTLTGFKWL MNVGIAQTQP DNQFLFAYEE ALGYTVGNMV WDKDGLSALV AFAQLTAELA AKGQSIWDRL EQIYREQGFH LNAQVSIALK PDTPNIGAYL REHPPLAIGE HAVVSTDDLK ALERRFADGK VEKINLPASD VLTYRLANGA RVIVRPSGTE PKIKCYYEVV EPMTAQDTLA SAQARATQAM EAFISAHQAS LPK
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