| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2538 |
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| Symbol | |
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| ID | 4253109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3022611 |
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| End bp | 3023309 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119173 |
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| Product | helix-turn-helix, type 11 domain-containing protein |
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| Protein accession | YP_734666 |
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| Protein GI | 113970873 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGTG CCGACCGCCT ATTTCAAATA GTGCAAATTC TTAAACATCG ACGATTAACG
ACCGCCCAAG AACTGGCGGA TCGTTTAGAA GTCTCGACCC GCACCGTGTA CCGCGATGTG
CAGGATTTAT GTTTGAGCGG AATTCCCATT GAAGGGGAGG CGGGTGTGGG CTATCTGTTG
CGCCACGAAG TGAATGTGCC GCCACTGATG TTTAACGAGG CCGAATTAGA AGCGATTCAA
GTTGGCATGC GTATGGTGCA AACATGGGGT GGCAAAGAGC TTGGCAGTGC GGCGCGTCAG
GCGATGATAA AAGTGGAAGC CGTGCTACCT AAGCGTTTGC AAGCTTATCA ATCCTTGATG
TTTTCACCGG ATTTTTATTT AGATTCCAAC GAGTTTCAGT TTCTCGACCC GCTGCGTAAT
GCGGCCCAAC GCCGTGAGTA CGTCAAACTC TTCTATCAAG ATGTTAATAA AGCCCTGACC
GAGCGCGAAG TGCGGCCGCT CGCCATCTAT TTTTGGCGCG GCACTTGGAC CTTGCTGACT
TGGTGTGAAT TACGCCAAGA TTTTCGCAAC TTTCGGGTCG ATCGTATCAC CGGATTGTTA
AGGCTTAACC GACATTTTGA ACCGACGCCG GGGCAGGAGT TAGAGGATTA TATTTGTCTG
ATGGACGCCC AGATGCGCGA GCGTGAAGCC GAAAAATAA
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| Protein sequence | MRRADRLFQI VQILKHRRLT TAQELADRLE VSTRTVYRDV QDLCLSGIPI EGEAGVGYLL
RHEVNVPPLM FNEAELEAIQ VGMRMVQTWG GKELGSAARQ AMIKVEAVLP KRLQAYQSLM
FSPDFYLDSN EFQFLDPLRN AAQRREYVKL FYQDVNKALT EREVRPLAIY FWRGTWTLLT
WCELRQDFRN FRVDRITGLL RLNRHFEPTP GQELEDYICL MDAQMREREA EK
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