| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2536 |
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| Symbol | |
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| ID | 4253107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3018588 |
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| End bp | 3019373 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119171 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_734664 |
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| Protein GI | 113970871 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTACTT TGAACACGAT AGAAAGGCAG CAGGAAATTG TGCGAATGAC ACAGTTACAG
GGAAAGGTCT CTGTTGCCGA ACTCGCAGAA CACTTTGGGG TATCTGAAGT CACGATCCGC
AGCGATTTAG CCATGTTGGA TCAAAAGCAG TTACTGGTGC GCTCCCGGGG CGGCGCTATG
GTCAACAGCG AGTTGATCCG GGAGTTATCA CTGAAGGAGA AGGGCAGTTG CCATTCGGCC
TTAAAGCAAG AGTTAGGTAA GGCCGCGGCG GCCTTGGTGC AAAACGGCGA TCGCTTATTG
CTCGACTCGG GGACGACCAC CCAACAGGTG GCGGCGAACC TGATGGAGCA TAAGGATCTG
ATCGTGATGA CCAATGGCCT GAATATCGCC ACCGAATTGG CTAAGGCTGA CGAAGTGGAG
GTGATGTTAA CCGGCGGGCT GTTACGTAAA AAATCCCTGT CGTTCTACGG CAATATCGCC
GAGAACAGCC TGCGGGATTA CAACTTTAAC AAGTTGATTT TAGGGGTAGA TGGTTTCGAT
TTGCGGGTGG GATTAACCAC TCACTTTGAA AAAGAGGCCA GCCTCAACCG AATGATGTGT
GAGATAGCGA GTGAAATTAT CGTTGTGACT GACTCATCAA AGTTTGATCA ACAAGCATTC
CACGTTATTT GCAGCAGTCG CCGTATTACG CGCCTAGTGA CAGATACCGG GATCCCAGAG
CGCTATGTTG ATGAATTAAC TAAACAAGGT GTGCAATTAC ACCTCATTGA GAAAGCTAAT
TTATAA
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| Protein sequence | MSTLNTIERQ QEIVRMTQLQ GKVSVAELAE HFGVSEVTIR SDLAMLDQKQ LLVRSRGGAM
VNSELIRELS LKEKGSCHSA LKQELGKAAA ALVQNGDRLL LDSGTTTQQV AANLMEHKDL
IVMTNGLNIA TELAKADEVE VMLTGGLLRK KSLSFYGNIA ENSLRDYNFN KLILGVDGFD
LRVGLTTHFE KEASLNRMMC EIASEIIVVT DSSKFDQQAF HVICSSRRIT RLVTDTGIPE
RYVDELTKQG VQLHLIEKAN L
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