| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2530 |
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| Symbol | |
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| ID | 4253101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3011159 |
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| End bp | 3012517 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119165 |
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| Product | major facilitator transporter |
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| Protein accession | YP_734658 |
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| Protein GI | 113970865 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA CGTCCGACAG TACCCAAGCC ACGGCCTCAC CGCAGGGCAG TTTTATTCCT
ATGTTATTGA TAGGGATTTT ATTTTTTGTC TTTGGCTTTG TGACTTGGCT CAATGGTGCC
TTGATCCCAT TTTTAAAAAT TGCCTGTCAG TTGAATGAGT TTGAAGCCTA TTTAGTCACC
TTTGTGTTTT ACATTGCTTA TTTTGTGATG GCGCTACCGA CCTCATCCAT CCTCACGCGT
CTTGGCTATA AGATGGGCAT GACCTTAGGT TTAGGGATCA TGGCGGCAGG CGCGGGCTTG
TTTATTGTGG CGGCTTTGGT CGGCCATTTT GCGACCTTCC TCTTGGCGTT ATTTGTGTTG
GGCACGGGCT TAACCTTGCT GCAAACGGCC GCCAATCCTT ACATTGTCTG TATTGGCCCA
CGGGAAAGTG CGGCAATGCG GATAAGTTTA ATGGGGATTG TGAATAAGGG CGCGGGCTTT
ATTGTGCCAA TTATCTTTAC TGCCTGGATT TTAACGGGCA TGGAACCTTA CAGTGAAACG
GCATTGGCCA GCCTGTCCGA AGCGCAGCGC GAATTGGCGT TAACGGAATT AGCCAATCGT
TTAGTACAAC CCTATTTAAT GATGATGTTT GTACTACTGG GATTGATGGC CTTTGTGTGG
TTTTCACCGC TGCCAGAGCC CGAATTAGGT GAGCGAGTCG AGCGTACTCA AGCCGATTGG
AAGGCTATTT TACAGTTTCC GCAGGTGATC TTAGGGGCAC TAACACTCTT CTGTTATGTG
GGTGCCGAGG TGATTGCCGG TGATAGCATA GGACTATTTA GTCAAGGACT CGGGGTTGCC
CACTTTGGCA TGATGACCTC CTACACCATG GGATTTATGG TACTTGGCTA TGTGCTCGGA
ATCGTGCTGA TCCCAAGATG GATCAGCCAG CAAACGGCAT TAGTGGGTTC GGCCGTCGCG
GGCTTGTTAT TTACCCTTGG GGTCTTGCTC AGCGACAGTC AAAGCCAAGG TTTATCTGAG
CTGTTACTCG GTTGGTTAGG CGTCTTACCC GTGCCCGATC CCGTGCTTTA CTTAGCCCTG
CTTGGGTTGG CAAACGCCTT GGTATGGCCT GCGGTGTGGC CATTAGCCCT TGAAGGACTC
GGGCGCTTAA CGGCCACGGC ATCGGCGCTA CTGATCATGG GGATTGCGGG CGGTGCGATT
CTGCCACTGC TCTATGGTTA CATCGCCCAT AGCCAAGGTG ACAGCCAAAT GGCGTATTTC
TTACTGTTAC CTTGCTACGG CTTAATTTTT TACTACGCCA TTTGGGGCCA TAAGTTAACG
GCCAAAGTGG CCTCTAGCAC TGCTATGGTT AATGAATAG
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| Protein sequence | MKFTSDSTQA TASPQGSFIP MLLIGILFFV FGFVTWLNGA LIPFLKIACQ LNEFEAYLVT
FVFYIAYFVM ALPTSSILTR LGYKMGMTLG LGIMAAGAGL FIVAALVGHF ATFLLALFVL
GTGLTLLQTA ANPYIVCIGP RESAAMRISL MGIVNKGAGF IVPIIFTAWI LTGMEPYSET
ALASLSEAQR ELALTELANR LVQPYLMMMF VLLGLMAFVW FSPLPEPELG ERVERTQADW
KAILQFPQVI LGALTLFCYV GAEVIAGDSI GLFSQGLGVA HFGMMTSYTM GFMVLGYVLG
IVLIPRWISQ QTALVGSAVA GLLFTLGVLL SDSQSQGLSE LLLGWLGVLP VPDPVLYLAL
LGLANALVWP AVWPLALEGL GRLTATASAL LIMGIAGGAI LPLLYGYIAH SQGDSQMAYF
LLLPCYGLIF YYAIWGHKLT AKVASSTAMV NE
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